We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SARS1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SARS1
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:83.3 nTPM
GTEx:72.7 nTPM
FANTOM5:218.8 Scaled Tags Per Million
Pig:83.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.3
Sample id Sample description nTPM
Putamen
nTPM: 83.3
2482 Female, age 94, left hemisphere 106.4
1838 Male, age 80, right hemisphere 87.4
1937 Female, age 91, right hemisphere 85.0
2466 Female, age 79, unknown 83.5
1829 Male, age 74, unknown 81.5
2647 Male, age 75, left hemisphere 75.1
2489 Female, age 72, unknown 64.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 72.7
Samples: 254

Max nTPM: 141.9
Min nTPM: 43.4
Std nTPM: 16.4
Median nTPM: 69.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 141.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 139.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 131.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 125.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 123.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 118.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 109.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 108.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 108.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 107.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 105.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 103.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 103.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 102.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 101.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 101.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 100.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 100.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 100.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 100.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 97.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 97.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 96.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 96.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 96.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 95.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 95.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 94.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 93.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 93.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 92.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 91.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 91.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 90.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 88.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 87.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 87.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 87.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 87.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 87.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 87.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 87.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 86.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 85.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 85.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 85.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 85.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 85.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 85.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 84.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 84.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 84.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 84.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 84.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 84.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 83.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 82.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 82.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 82.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 82.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 82.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 81.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 81.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 81.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 81.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 81.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 80.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 80.2
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 79.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 79.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 79.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 79.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 79.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 79.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 78.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 77.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 77.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 77.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 77.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 77.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 77.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 77.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 77.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 77.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 76.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 75.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 75.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 75.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 75.3
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 75.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 75.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 75.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 75.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 74.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 74.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 74.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 74.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 74.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 73.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 73.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 73.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 72.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 72.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 72.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 71.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 71.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 71.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 71.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 71.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 71.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 71.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 71.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 71.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 70.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 70.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 70.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 70.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 70.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 70.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 70.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 70.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 69.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 69.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 69.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 69.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 69.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 69.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 69.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 69.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 69.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 69.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 69.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 68.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 68.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 68.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 67.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 67.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 67.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 67.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 67.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 67.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 67.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 66.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 66.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 66.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 66.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 66.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 66.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 66.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 66.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 66.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 66.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 66.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 65.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 65.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 65.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 65.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 65.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 64.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 64.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 64.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 64.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 64.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 64.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 64.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 63.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 63.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 63.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 63.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 63.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 63.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 63.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 63.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 63.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 63.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 62.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 62.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 62.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 62.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 62.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 62.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 62.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 62.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 62.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 62.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 61.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 61.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 61.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 61.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 61.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 61.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 61.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 60.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 60.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 60.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 60.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 60.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 60.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 60.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 60.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 59.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 59.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 59.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 59.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 59.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 59.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 58.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 58.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 58.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 58.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 58.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 57.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 57.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 57.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 56.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 56.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 56.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 56.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 56.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 56.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 56.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 56.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 56.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 56.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 56.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 56.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 56.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 55.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 55.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 55.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 55.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 54.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 54.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 54.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 54.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 54.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 54.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 53.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 53.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 53.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 53.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 52.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 52.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 52.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 52.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 52.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 51.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 50.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 49.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 49.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 48.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 47.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 46.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 43.4
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

218.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 218.8
FF:10176-103C5 60 years, female 218.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.6
Pig sample Sample description nTPM
Putamen
nTPM: 83.6
Samples: 4

Max nTPM: 116.3
Min nTPM: 63.0
Sample A Female 63.0
Sample B Female 71.2
Sample C Male 116.3
Sample D Male 84.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo