We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PFKP
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • PFKP
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:108.5 nTPM
GTEx:58.9 nTPM
FANTOM5:68.1 Scaled Tags Per Million
Pig:96.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.5
Sample id Sample description nTPM
Putamen
nTPM: 108.5
2647 Male, age 75, left hemisphere 160.8
2489 Female, age 72, unknown 125.0
2482 Female, age 94, left hemisphere 122.2
2466 Female, age 79, unknown 108.8
1829 Male, age 74, unknown 87.9
1838 Male, age 80, right hemisphere 87.2
1937 Female, age 91, right hemisphere 67.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 58.9
Samples: 254

Max nTPM: 123.1
Min nTPM: 15.3
Std nTPM: 19.0
Median nTPM: 57.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 123.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 122.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 115.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 113.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 111.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 107.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 106.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 101.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 96.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 93.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 93.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 93.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 90.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 89.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 87.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 87.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 87.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 86.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 85.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 85.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 85.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 85.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 82.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 82.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 82.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 81.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 80.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 80.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 79.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 79.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 79.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 79.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 79.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 78.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 78.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 77.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 77.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 76.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 76.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 75.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 75.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 75.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 75.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 75.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 75.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 75.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 75.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 74.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 74.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 74.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 74.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 74.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 73.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 73.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 73.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 72.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 72.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 71.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 71.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 71.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 71.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 71.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 71.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 70.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 70.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 70.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 70.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 70.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 70.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 70.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 69.9
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 69.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 69.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 69.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 69.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 68.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 68.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 67.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 67.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 67.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 66.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 66.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 66.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 66.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 66.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 65.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 65.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 64.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 64.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 64.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 64.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 64.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 63.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 63.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 63.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 63.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 63.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 63.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 62.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 62.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 62.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 62.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 62.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 62.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 62.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 62.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 61.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 61.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 61.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 61.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 61.4
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 60.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 60.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 59.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 59.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 59.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 59.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 59.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 59.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 58.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 58.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 58.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 58.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 58.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 57.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 57.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 57.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 57.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 57.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 57.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 57.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 56.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 56.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 56.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 56.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 56.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 56.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 56.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 55.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 55.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 55.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 55.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 55.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 54.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 54.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 54.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 54.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 54.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 54.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 54.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 53.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 53.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 53.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 53.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 53.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 53.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 52.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 52.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 52.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 52.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 52.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 50.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 50.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 50.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 50.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 50.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 50.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 50.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 49.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 49.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 48.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 48.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 48.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 48.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 48.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 48.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 48.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 48.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 48.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 47.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 47.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 47.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 47.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 47.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 47.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 47.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 46.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 46.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 46.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 46.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 46.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 45.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 45.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 45.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 45.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 45.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 44.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 44.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 44.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 44.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 44.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 43.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 43.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 43.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 42.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 42.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 41.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 41.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 40.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 40.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 40.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 39.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 39.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 39.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 39.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 39.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 38.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 38.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 38.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 38.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 38.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 37.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 36.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 36.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 36.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 35.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 35.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 35.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 35.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 34.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 33.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 32.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 32.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 32.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 31.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 31.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 31.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 31.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 29.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 29.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 29.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 28.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 28.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 27.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 27.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 27.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 25.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 23.7
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 23.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 16.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 16.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 15.3
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

68.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 68.1
FF:10176-103C5 60 years, female 68.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.1
Pig sample Sample description nTPM
Putamen
nTPM: 96.1
Samples: 4

Max nTPM: 159.0
Min nTPM: 43.7
Sample A Female 43.7
Sample B Female 76.5
Sample C Male 159.0
Sample D Male 105.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo