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  • SUMMARY

  • TISSUE

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  • BLOOD

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  • SMAP2
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:61.0 nTPM
GTEx:45.3 nTPM
FANTOM5:158.2 Scaled Tags Per Million
Pig:151.5 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.0
Sample id Sample description nTPM
Putamen
nTPM: 61.0
2466 Female, age 79, unknown 74.8
1829 Male, age 74, unknown 74.5
1937 Female, age 91, right hemisphere 65.5
1838 Male, age 80, right hemisphere 62.8
2489 Female, age 72, unknown 51.6
2482 Female, age 94, left hemisphere 51.1
2647 Male, age 75, left hemisphere 46.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 45.3
Samples: 254

Max nTPM: 149.3
Min nTPM: 15.5
Std nTPM: 18.8
Median nTPM: 42.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 149.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 108.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 87.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 86.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 85.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 84.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 81.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 80.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 78.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 76.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 76.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 76.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 75.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 74.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 74.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 73.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 73.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 73.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 72.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 72.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 71.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 70.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 70.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 69.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 69.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 68.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 68.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 68.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 68.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 68.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 67.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 67.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 67.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 67.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 66.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 66.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 66.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 65.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 65.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 65.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 65.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 63.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 63.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 63.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 63.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 63.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 63.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 63.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 63.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 61.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 61.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 61.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 61.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 60.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 60.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 60.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 60.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 59.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 59.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 59.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 59.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 58.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 58.5
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 58.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 58.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 58.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 57.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 57.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 57.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 57.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 57.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 56.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 56.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 56.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 55.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 55.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 54.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 54.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 54.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 54.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 53.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 53.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 52.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 52.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 52.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 52.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 52.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 51.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 51.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 51.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 51.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 51.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 51.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 51.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 51.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 50.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 50.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 50.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 50.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 49.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 49.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 49.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 48.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 48.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 48.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 48.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 48.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 47.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 47.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 47.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 47.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 47.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 46.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 46.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 45.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 45.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 45.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 45.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 45.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 45.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 44.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 44.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 44.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 43.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 42.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 42.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 42.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 42.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 42.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 41.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 41.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 41.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 41.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 40.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 40.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 40.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 40.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 40.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 40.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 39.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 39.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 39.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 39.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 38.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 38.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 38.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 38.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 38.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 38.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 37.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 37.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 37.5
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 37.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 37.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 37.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 36.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 36.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 36.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 36.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 36.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 36.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 36.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 35.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 35.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 35.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 35.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 35.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 34.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 34.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 34.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 33.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 33.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 33.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 33.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 33.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 33.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 32.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 32.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 32.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 31.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 31.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 31.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 31.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 30.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 30.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 30.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 30.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 30.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 30.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 30.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 30.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 30.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 29.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 29.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 29.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 29.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 29.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 29.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 29.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 28.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 28.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 28.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 28.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 27.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 27.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 27.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 27.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 26.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 26.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 26.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 26.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 25.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 25.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 25.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 25.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 25.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 25.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 25.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 24.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 24.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 24.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 24.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 24.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 24.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 23.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 23.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 23.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 23.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 23.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 21.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 21.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 21.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 21.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 21.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 20.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 20.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 20.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 20.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 20.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 19.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 19.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 19.1
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 19.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 19.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 18.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 18.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 18.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 17.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 17.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 16.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 16.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 15.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 15.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

158.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 158.2
FF:10176-103C5 60 years, female 158.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.5
Pig sample Sample description nTPM
Putamen
nTPM: 151.5
Samples: 4

Max nTPM: 182.0
Min nTPM: 117.7
Sample A Female 117.7
Sample B Female 141.4
Sample C Male 182.0
Sample D Male 164.9

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