We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
APLP2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • APLP2
TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
Tissue methods
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:163.3 nTPM
GTEx:113.7 nTPM
FANTOM5:372.1 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA039319
Glial cells Medium
Neuronal cells High



HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

163.3
Sample id Sample description nTPM
Hippocampus
nTPM: 163.3
1898 Male, age 80, left hemisphere 203.3
1855 Male, age 76, left hemisphere 173.3
2621 Female, age 67, right hemisphere 158.1
2529 Female, age 94, left hemisphere 155.3
2148 Female, age 91, left hemisphere 151.2
1911 Female, age 85, right hemisphere 139.0

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 113.7
Samples: 255

Max nTPM: 209.8
Min nTPM: 57.8
Std nTPM: 26.4
Median nTPM: 111.6
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 209.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 192.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 187.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 181.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 171.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 169.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 169.0
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 166.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 166.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 162.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 161.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 159.3
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 159.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 158.4
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 157.4
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 157.3
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 155.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 155.0
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 154.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 153.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 153.4
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 152.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 151.0
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 150.9
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 150.0
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 149.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 149.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 148.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 147.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 147.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 147.2
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 147.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 145.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 145.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 144.7
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 144.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 144.0
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 141.1
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 140.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 139.4
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 138.8
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 137.5
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 136.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 136.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 136.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 136.2
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 136.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 136.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 135.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 135.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 134.9
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 134.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 133.6
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 133.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 132.8
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 132.7
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 132.7
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 132.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 132.2
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 131.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 131.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 131.5
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 131.3
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 131.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 131.2
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 130.3
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 130.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 130.0
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 128.5
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 128.2
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 127.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 126.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 126.8
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 126.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 126.6
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 126.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 126.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 125.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 125.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 125.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 124.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 124.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 123.5
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 123.4
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 123.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 122.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 122.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 122.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 122.3
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 122.2
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 122.1
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 121.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 121.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 120.7
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 120.6
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 120.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 119.9
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 119.8
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 119.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 119.2
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 119.1
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 119.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 118.8
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 118.8
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 118.6
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 118.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 118.5
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 118.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 118.3
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 117.6
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 117.4
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 117.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 116.4
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 116.4
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 115.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 115.6
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 115.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 115.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 114.1
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 113.7
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 113.6
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 113.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 113.2
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 112.8
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 112.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 112.6
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 112.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 111.6
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 111.4
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 111.4
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 111.3
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 111.2
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 111.0
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 110.7
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 110.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 110.4
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 110.4
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 109.9
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 109.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 109.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 109.2
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 109.1
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 108.6
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 108.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 107.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 107.3
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 107.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 107.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 106.1
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 105.7
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 105.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 104.6
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 104.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 103.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 103.0
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 102.5
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 102.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 102.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 102.3
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 102.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 102.1
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 102.0
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 101.6
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 101.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 101.4
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 101.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 101.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 101.0
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 100.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 100.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 100.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 99.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 99.7
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 99.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 99.0
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 98.7
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 98.3
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 98.3
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 98.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 98.1
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 98.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 98.0
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 97.8
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 97.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 96.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 96.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 96.5
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 96.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 96.2
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 96.0
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 96.0
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 95.6
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 95.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 95.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 95.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 95.0
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 95.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 94.8
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 94.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 94.3
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 94.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 92.3
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 92.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 91.8
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 91.7
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 91.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 91.0
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 91.0
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 90.5
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 90.4
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 89.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 89.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 89.1
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 88.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 87.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 87.1
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 86.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 86.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 85.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 85.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 85.5
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 85.3
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 85.1
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 84.5
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 84.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 84.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 83.5
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 83.5
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 81.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 81.3
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 80.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 80.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 80.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 79.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 79.1
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 77.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 76.5
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 74.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 73.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 73.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 73.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 72.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 72.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 71.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 70.9
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 70.4
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 69.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 69.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 67.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 64.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 62.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 60.0
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 58.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 58.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 57.8
Show allShow less

HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

372.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 372.1
FF:10169-103B7 60 years, female 439.3
FF:10153-102I9 76 years, female 304.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo