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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
27.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 27.2
Samples: 105
Max nTPM: 56.2
Min nTPM: 13.7
Std nTPM: 7.0
Median nTPM:
491_1
89 years, female
56.2
490_1
67 years, female
52.2
89_1
63 years, male
42.4
414_1
84 years, female
40.7
415_1
77 years, female
38.5
495_1
57 years, female
38.2
41_1
94 years, female
38.1
162_1
79 years, female
38.0
466_1
57 years, female
37.4
317_1
60 years, male
37.1
308_1
70 years, female
36.8
142_1
61 years, female
36.2
315_1
62 years, female
35.5
347_1
72 years, male
35.0
119_1
70 years, female
34.7
307_1
66 years, female
33.5
117_1
61 years, male
32.8
501_1
88 years, male
32.6
149_1
88 years, male
32.5
266_1
85 years, male
32.3
313_1
79 years, female
32.2
109_1
81 years, female
31.9
447_1
81 years, male
31.7
18_1
88 years, male
31.5
468_1
89 years, male
31.4
99_1
64 years, male
30.8
217_1
76 years, male
30.7
42_1
85 years, male
30.6
288_1
66 years, female
30.5
115_1
83 years, male
30.1
324_1
76 years, male
30.1
120_1
70 years, female
30.0
396_1
62 years, male
30.0
145_1
84 years, male
29.8
32_1
67 years, male
29.6
254_1
77 years, female
29.0
355_1
70 years, female
28.9
173_1
67 years, male
28.6
526_1
61 years, male
28.2
137_1
83 years, male
27.9
314_1
67 years, male
27.7
425_1
59 years, female
27.7
6_1
73 years, female
27.6
153_1
70 years, female
27.5
404_1
82 years, female
27.4
413_1
59 years, female
27.3
379_1
60 years, male
27.1
311_1
78 years, male
26.6
375_1
74 years, female
26.4
229_1
69 years, female
26.3
389_1
86 years, female
26.2
499_1
55 years, female
26.2
43_1
64 years, female
26.1
139_1
64 years, female
26.1
265_1
87 years, male
26.1
291_1
76 years, male
26.1
243_1
75 years, male
26.0
17_1
71 years, male
25.9
348_1
84 years, male
25.9
81_1
67 years, male
25.2
264_1
73 years, female
24.9
9_1
66 years, female
24.7
405_1
91 years, male
24.7
452_1
88 years, female
24.7
126_1
63 years, male
24.6
386_1
76 years, male
24.6
35_1
74 years, female
24.4
189_1
76 years, male
24.3
246_1
77 years, male
24.2
251_1
78 years, male
24.1
406_1
79 years, male
24.1
349_1
83 years, male
23.9
480_1
63 years, male
23.2
506_1
65 years, male
23.2
517_1
88 years, male
23.0
318_1
68 years, male
22.7
322_1
76 years, male
22.7
350_1
84 years, female
22.6
335_1
73 years, female
22.5
352_1
62 years, male
22.5
384_1
83 years, male
22.5
286_1
68 years, female
22.3
237_1
82 years, male
22.2
354_1
81 years, female
22.1
177_1
74 years, male
21.8
377_1
82 years, female
21.6
321_1
62 years, female
21.3
2_1
77 years, female
21.1
503_1
68 years, male
21.1
172_1
72 years, female
20.8
351_1
91 years, male
20.7
295_1
61 years, female
20.3
292_1
71 years, male
20.1
293_1
68 years, female
20.0
4_1
88 years, female
19.9
376_1
75 years, female
19.6
320_1
89 years, female
19.4
356_1
87 years, female
18.6
353_1
82 years, female
18.4
518_1
75 years, female
16.8
218_1
71 years, female
16.5
394_1
75 years, female
16.1
319_1
81 years, male
15.2
316_1
62 years, male
14.9
163_1
78 years, male
13.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
