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SLC8B1
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • SLC8B1
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:17.0 nTPM
GTEx:7.3 nTPM
FANTOM5:8.3 Scaled Tags Per Million
Pig:3.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.0
Sample id Sample description nTPM
Putamen
nTPM: 17.0
2647 Male, age 75, left hemisphere 22.5
2489 Female, age 72, unknown 20.8
2482 Female, age 94, left hemisphere 17.1
2466 Female, age 79, unknown 16.5
1829 Male, age 74, unknown 16.1
1937 Female, age 91, right hemisphere 14.0
1838 Male, age 80, right hemisphere 12.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 7.3
Samples: 254

Max nTPM: 14.9
Min nTPM: 1.8
Std nTPM: 2.1
Median nTPM: 7.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 14.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 14.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 13.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 12.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 12.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 12.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 11.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 11.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 11.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 11.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 11.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 11.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 11.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 11.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 11.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 10.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 10.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 10.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 10.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 10.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 10.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 10.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 10.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 10.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 10.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 10.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 10.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 10.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 10.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 10.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 9.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 9.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 9.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 9.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 9.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 9.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 9.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 9.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 9.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 9.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 9.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 9.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 9.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 9.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 9.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 9.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 9.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 9.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 9.0
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 9.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 8.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 8.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 8.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 8.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 8.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 8.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 8.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 8.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 8.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 8.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 8.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 8.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 8.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 8.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 8.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 8.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 8.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 8.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 8.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 8.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 8.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 8.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 8.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 8.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 8.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 8.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 8.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 8.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 8.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 8.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 8.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 8.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 8.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 7.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 7.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 7.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 7.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 7.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 7.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 7.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 7.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 7.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 7.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 7.7
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 7.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 7.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 7.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 7.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 7.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 7.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 7.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 7.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 7.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 7.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 7.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 7.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 7.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 7.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 7.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 7.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 7.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 7.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 7.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 7.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 7.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 7.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 7.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 7.2
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 7.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 7.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 7.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 7.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 7.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 7.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 7.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 7.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 7.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 7.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 7.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 7.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 7.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 7.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 6.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 6.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 6.9
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 6.9
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 6.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 6.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 6.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 6.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 6.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 6.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 6.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 6.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 6.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 6.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 6.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 6.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 6.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 6.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 6.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 6.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 6.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 6.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 6.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 6.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 6.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 6.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 6.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 6.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 6.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 6.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 6.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 6.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 6.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 6.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 6.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 6.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 6.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 6.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 6.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 6.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 6.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 6.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 6.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 6.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 6.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 6.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 6.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 6.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 6.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 6.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 6.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 6.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 6.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 6.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 6.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 5.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 5.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 5.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 5.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 5.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 5.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 5.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 5.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 5.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 5.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 5.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 5.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 5.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 5.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 5.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 5.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 5.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 5.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 5.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 5.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 5.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 5.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 5.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 5.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 5.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 4.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 4.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 4.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 4.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 4.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 4.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 4.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 4.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 4.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 4.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 4.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 4.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 4.4
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 4.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 4.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 4.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 4.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 4.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 4.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 4.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 4.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 4.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 4.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 4.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 3.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 3.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 3.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 3.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 3.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 3.3
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 3.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 3.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 2.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

8.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 8.3
FF:10176-103C5 60 years, female 8.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.7
Pig sample Sample description nTPM
Putamen
nTPM: 3.8
Samples: 4

Max nTPM: 5.2
Min nTPM: 2.7
Sample A Female 5.2
Sample B Female 3.4
Sample C Male 2.7
Sample D Male 3.7

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