We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TUBB4A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • TUBB4A
TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
Tissue methods
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:617.6 nTPM
GTEx:536.8 nTPM
FANTOM5:551.9 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA043640Antibody HPA046280Antibody CAB010768
Glial cells Not detectedNot detectedMedium
Neuronal cells LowMediumLow





HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

617.6
Sample id Sample description nTPM
Hippocampus
nTPM: 617.6
2621 Female, age 67, right hemisphere 759.7
1898 Male, age 80, left hemisphere 697.7
1911 Female, age 85, right hemisphere 606.3
2529 Female, age 94, left hemisphere 589.1
1855 Male, age 76, left hemisphere 574.0
2148 Female, age 91, left hemisphere 478.7

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

536.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 536.8
Samples: 255

Max nTPM: 1514.5
Min nTPM: 147.4
Std nTPM: 238.8
Median nTPM: 482.5
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1514.5
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 1223.2
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 1196.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1183.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 1155.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1134.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1105.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 1099.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1096.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 1094.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 1039.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 1012.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 958.9
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 957.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 951.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 940.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 931.8
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 929.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 918.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 909.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 900.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 899.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 897.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 894.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 879.6
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 865.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 862.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 851.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 849.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 845.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 841.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 841.0
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 836.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 829.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 821.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 819.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 818.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 803.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 784.3
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 784.0
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 777.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 775.3
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 769.9
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 767.8
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 759.7
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 755.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 750.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 748.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 746.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 746.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 740.8
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 740.0
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 737.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 731.9
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 727.1
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 726.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 721.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 720.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 713.7
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 710.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 708.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 704.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 704.1
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 683.0
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 682.2
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 680.7
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 678.0
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 677.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 664.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 663.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 661.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 659.8
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 645.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 642.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 640.1
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 629.5
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 625.5
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 625.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 624.6
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 622.9
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 621.9
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 621.0
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 620.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 618.9
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 618.2
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 611.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 608.1
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 608.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 600.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 587.5
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 575.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 573.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 572.3
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 566.8
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 557.3
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 556.1
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 554.8
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 548.9
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 542.1
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 538.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 537.9
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 535.8
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 529.4
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 526.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 526.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 522.6
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 522.4
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 518.4
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 518.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 515.6
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 515.2
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 512.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 512.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 510.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 509.3
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 508.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 506.6
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 505.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 503.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 502.1
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 501.5
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 499.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 497.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 497.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 488.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 484.5
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 482.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 482.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 481.5
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 480.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 479.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 479.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 472.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 470.0
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 469.4
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 468.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 467.4
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 466.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 464.6
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 462.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 460.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 460.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 459.3
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 459.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 458.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 455.7
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 455.5
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 455.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 453.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 449.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 449.5
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 448.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 444.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 444.5
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 441.3
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 428.6
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 425.8
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 425.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 422.1
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 419.1
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 418.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 418.2
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 413.5
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 409.5
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 407.1
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 405.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 402.8
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 402.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 400.8
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 399.6
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 395.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 392.0
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 388.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 386.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 383.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 382.9
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 380.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 376.3
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 376.3
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 376.2
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 375.2
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 372.7
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 372.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 369.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 367.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 367.2
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 366.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 360.5
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 358.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 358.3
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 358.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 356.7
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 353.7
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 353.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 352.9
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 352.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 351.5
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 350.3
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 349.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 348.0
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 343.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 342.0
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 340.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 333.7
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 332.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 331.3
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 328.2
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 323.3
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 321.2
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 315.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 314.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 314.1
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 312.4
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 311.9
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 307.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 305.9
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 304.1
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 302.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 302.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 297.6
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 290.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 289.2
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 282.7
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 282.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 281.3
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 274.8
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 272.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 269.2
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 265.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 264.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 264.0
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 263.7
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 261.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 259.1
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 254.8
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 254.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 246.2
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 245.2
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 238.5
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 234.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 233.7
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 231.4
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 226.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 222.1
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 219.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 218.3
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 216.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 214.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 214.3
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 211.7
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 210.0
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 205.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 205.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 189.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 147.4
Show allShow less

HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

551.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 551.9
FF:10169-103B7 60 years, female 635.6
FF:10153-102I9 76 years, female 468.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo