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  • TISSUE

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TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:77.4 nTPM
GTEx:153.2 nTPM
FANTOM5:6.9 Scaled Tags Per Million
Pig:125.3 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.4
Sample id Sample description nTPM
Putamen
nTPM: 77.4
2482 Female, age 94, left hemisphere 93.0
2466 Female, age 79, unknown 83.0
1937 Female, age 91, right hemisphere 81.7
1838 Male, age 80, right hemisphere 81.5
1829 Male, age 74, unknown 75.1
2647 Male, age 75, left hemisphere 68.8
2489 Female, age 72, unknown 58.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

153.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 153.2
Samples: 254

Max nTPM: 385.7
Min nTPM: 83.5
Std nTPM: 30.7
Median nTPM: 149.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 385.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 287.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 249.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 230.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 220.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 220.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 218.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 216.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 212.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 206.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 205.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 203.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 203.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 202.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 199.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 195.8
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 194.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 193.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 192.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 192.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 188.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 187.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 186.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 184.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 182.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 182.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 182.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 182.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 182.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 180.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 179.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 178.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 178.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 178.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 177.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 177.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 176.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 175.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 175.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 175.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 174.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 174.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 174.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 174.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 174.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 174.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 174.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 173.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 173.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 173.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 172.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 172.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 171.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 171.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 171.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 170.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 170.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 170.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 170.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 170.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 170.1
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 170.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 169.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 168.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 167.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 167.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 166.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 165.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 165.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 165.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 165.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 165.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 165.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 164.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 164.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 163.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 163.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 162.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 162.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 162.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 162.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 162.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 162.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 162.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 162.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 162.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 161.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 161.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 161.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 160.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 160.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 159.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 159.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 158.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 158.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 158.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 157.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 157.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 156.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 156.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 155.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 155.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 155.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 155.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 155.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 154.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 154.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 154.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 154.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 153.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 153.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 152.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 152.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 152.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 151.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 151.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 151.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 151.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 150.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 150.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 150.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 150.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 150.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 150.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 150.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 149.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 149.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 149.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 148.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 148.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 148.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 148.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 148.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 148.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 148.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 147.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 147.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 147.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 146.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 146.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 146.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 146.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 146.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 146.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 145.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 145.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 145.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 145.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 144.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 144.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 144.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 144.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 144.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 144.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 144.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 144.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 143.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 143.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 143.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 142.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 142.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 142.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 142.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 142.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 142.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 141.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 141.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 141.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 141.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 141.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 140.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 139.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 139.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 139.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 139.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 139.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 139.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 139.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 138.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 138.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 138.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 138.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 138.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 138.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 137.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 137.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 137.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 137.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 136.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 135.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 135.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 135.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 135.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 135.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 134.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 134.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 134.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 133.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 132.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 131.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 131.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 131.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 131.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 131.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 130.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 130.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 130.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 130.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 130.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 130.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 129.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 128.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 128.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 127.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 127.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 126.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 125.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 124.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 124.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 124.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 124.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 123.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 123.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 122.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 122.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 122.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 121.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 121.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 121.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 121.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 120.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 120.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 120.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 120.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 119.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 117.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 117.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 116.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 116.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 114.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 113.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 113.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 108.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 108.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 107.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 107.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 105.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 104.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 102.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 100.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 99.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 98.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 89.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 83.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

6.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 6.9
FF:10176-103C5 60 years, female 6.9

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.3
Pig sample Sample description nTPM
Putamen
nTPM: 125.4
Samples: 4

Max nTPM: 172.5
Min nTPM: 91.0
Sample A Female 91.0
Sample B Female 108.0
Sample C Male 172.5
Sample D Male 129.9

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