PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:2947.3 nTPM
FANTOM5:5843.3 Scaled Tags Per Million
Mouse:4362.1 nTPM
Allen mouse:9.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 2947.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 2055.8
2188 Female, age 91, both hemispheres 2239.9
2090 Male, age 80, both hemispheres 2215.2
2301 Female, age 85, both hemispheres 2198.9
1984 Male, age 76, both hemispheres 1569.2
Area postrema
nTPM: 2382.7
2799 Male, age 61, both hemispheres 2816.9
2306 Male, age 80, both hemispheres 2571.3
2054 Male, age 76, both hemispheres 1759.9
Dorsal cochlear nucleus
nTPM: 1873.3
2370 Male, age 61, both hemispheres 2071.6
2058 Male, age 76, both hemispheres 1974.0
2187 Female, age 91, both hemispheres 1929.0
2378 Male, age 80, both hemispheres 1842.6
2802 Male, age 74, right hemisphere 1549.6
Dorsal medullary reticular nucleus
nTPM: 1956.3
2373 Male, age 61, both hemispheres 2045.8
2040 Female, age 85, both hemispheres 1916.2
2088 Male, age 76, both hemispheres 1906.8
Dorsal motor vagal complex
nTPM: 1703.1
2797 Male, age 61, both hemispheres 2744.6
2185 Male, age 76, both hemispheres 2517.6
2000 Male, age 74, unknown 1607.6
2844 Male, age 55, unknown 1550.0
2813 Female, age 72, unknown 1475.1
2133 Female, age 91, both hemispheres 1342.3
2643 Male, age 74, both hemispheres 1221.2
2807 Female, age 85, both hemispheres 1166.4
Dorsal tegmental nucleus
nTPM: 1857.9
2083 Male, age 80, both hemispheres 2393.3
1936 Male, age 76, left hemisphere 1813.2
2326 Male, age 74, both hemispheres 1630.8
2358 Male, age 61, both hemispheres 1594.3
Dorsolateral tegmental area
nTPM: 1885.9
2751 Female, age 85, both hemispheres 2396.9
2654 Male, age 80, both hemispheres 2290.1
2337 Male, age 61, both hemispheres 1728.7
2360 Male, age 74, both hemispheres 1519.0
2141 Male, age 76, both hemispheres 1494.8
Gigantocellular reticular nuclei, medullary
nTPM: 2037.6
2314 Male, age 61, both hemispheres 3226.2
1876 Female, age 85, both hemispheres 2074.9
2387 Female, age 91, both hemispheres 1768.1
2022 Male, age 76, right hemisphere 1764.6
2310 Male, age 80, both hemispheres 1715.0
2462 Male, age 74, both hemispheres 1676.8
Gigantocellular reticular nuclei, pars
nTPM: 1822.2
2336 Male, age 61, both hemispheres 2069.0
2084 Female, age 85, both hemispheres 1846.2
2330 Male, age 80, both hemispheres 1831.8
2706 Male, age 80, both hemispheres 1786.2
2168 Male, age 76, both hemispheres 1577.7
Inferior olive
nTPM: 2605.8
2178 Male, age 61, both hemispheres 3411.3
2563 Male, age 74, both hemispheres 2756.9
2085 Female, age 85, both hemispheres 2694.6
2628 Female, age 91, both hemispheres 2129.5
2379 Male, age 80, both hemispheres 2036.9
Kolliker-Fuse nucleus
nTPM: 2427.1
2315 Male, age 76, right hemisphere 2966.4
2793 Female, age 91, left hemisphere 2364.5
2163 Male, age 80, both hemispheres 1950.5
Lateral lemniscal nuclei
nTPM: 1902.3
2746 Female, age 85, left hemisphere 2252.5
2036 Male, age 80, both hemispheres 2111.6
2320 Female, age 91, left hemisphere 1858.8
2169 Male, age 76, both hemispheres 1722.8
2453 Male, age 74, right hemisphere 1565.7
Lateral medullary reticular nucleus
nTPM: 2461.5
2374 Male, age 61, both hemispheres 3094.0
2852 Male, age 80, both hemispheres 2837.5
2305 Male, age 74, both hemispheres 2594.7
2190 Female, age 85, both hemispheres 2168.7
2044 Male, age 76, both hemispheres 2103.8
2804 Female, age 91, both hemispheres 1970.2
Lateral parabrachial nucleus
nTPM: 2047.0
2792 Male, age 76, both hemispheres 2939.7
2139 Female, age 85, right hemisphere 2196.6
2013 Male, age 80, both hemispheres 2185.5
2790 Male, age 61, both hemispheres 866.0
Lateral vestibular nucleus
nTPM: 2105.6
2311 Male, age 80, both hemispheres 2138.4
2184 Male, age 76, both hemispheres 2072.8
Locus coeruleus
nTPM: 1289.5
2317 Female, age 72, unknown 1627.0
1980 Male, age 76, both hemispheres 1423.7
2123 Female, age 91, both hemispheres 1397.5
2162 Male, age 80, both hemispheres 1358.4
2014 Male, age 55, unknown 1290.3
2720 Male, age 74, both hemispheres 1015.8
2788 Male, age 74, unknown 914.0
Medial olivary nucleus
nTPM: 2802.0
1943 Male, age 61, both hemispheres 3700.0
1962 Male, age 76, both hemispheres 2709.1
2138 Female, age 91, both hemispheres 2487.2
2851 Male, age 80, both hemispheres 2311.7
Medial parabrachial nucleus
nTPM: 1964.4
2170 Female, age 91, both hemispheres 2308.7
2463 Female, age 85, right hemisphere 2270.4
2854 Male, age 80, both hemispheres 1942.8
2786 Male, age 76, both hemispheres 1932.8
2156 Male, age 61, both hemispheres 1367.5
Medial periolivary nuclei
nTPM: 1911.4
2791 Male, age 74, right hemisphere 2269.4
2081 Male, age 80, both hemispheres 2051.5
2063 Male, age 76, both hemispheres 1795.8
2458 Female, age 91, both hemispheres 1779.6
2171 Female, age 85, both hemispheres 1660.9
Medial vestibular nucleus
nTPM: 2054.6
2624 Male, age 61, both hemispheres 2988.9
2093 Male, age 80, both hemispheres 2186.4
2801 Male, age 74, both hemispheres 2118.5
2803 Female, age 91, both hemispheres 1966.3
2743 Female, age 85, both hemispheres 1618.0
2134 Male, age 76, both hemispheres 1449.6
Motor facial nucleus
nTPM: 1900.0
2126 Male, age 61, both hemispheres 2480.8
2365 Male, age 74, right hemisphere 2242.0
2062 Male, age 76, both hemispheres 1859.1
2697 Female, age 85, both hemispheres 1832.1
2795 Female, age 91, both hemispheres 1597.9
2327 Male, age 80, both hemispheres 1388.2
Motor hypoglossal nucleus
nTPM: 1764.2
2182 Male, age 80, both hemispheres 2117.4
2125 Female, age 91, both hemispheres 2051.2
2132 Female, age 85, both hemispheres 1739.0
2277 Male, age 76, both hemispheres 1625.4
2461 Male, age 61, both hemispheres 1288.0
Motor trigeminal nucleus
nTPM: 1843.2
2335 Male, age 61, both hemispheres 2234.7
2309 Male, age 76, both hemispheres 1813.6
2079 Male, age 80, both hemispheres 1792.2
2560 Male, age 74, both hemispheres 1770.6
2321 Female, age 91, both hemispheres 1604.7
Nuclei of the trapezoid body
nTPM: 1824.8
2159 Male, age 61, both hemispheres 2091.8
1983 Male, age 76, both hemispheres 1938.7
2166 Male, age 80, both hemispheres 1874.3
2368 Female, age 91, both hemispheres 1712.5
2735 Female, age 85, both hemispheres 1506.8
Nucleus ambiguus
nTPM: 2605.1
2071 Male, age 76, both hemispheres 3161.0
2096 Female, age 85, both hemispheres 2049.1
Nucleus cuneatus
nTPM: 2005.2
2380 Male, age 80, both hemispheres 2263.1
2100 Male, age 76, both hemispheres 2251.1
2376 Male, age 61, both hemispheres 2231.0
2562 Male, age 61, both hemispheres 2044.7
2808 Female, age 85, both hemispheres 2031.2
2564 Male, age 74, both hemispheres 1977.4
2381 Male, age 80, both hemispheres 1967.6
2131 Male, age 76, both hemispheres 1905.2
2805 Female, age 91, both hemispheres 1375.7
Nucleus gracilis
nTPM: 2081.9
2627 Male, age 74, both hemispheres 2261.9
2382 Male, age 80, both hemispheres 2216.0
2299 Female, age 85, both hemispheres 1767.9
Nucleus raphe magnus
nTPM: 1749.1
2051 Male, age 76, both hemispheres 2140.9
2455 Male, age 74, both hemispheres 1981.1
2160 Male, age 61, both hemispheres 1809.2
2328 Male, age 80, both hemispheres 1725.9
2459 Female, age 91, both hemispheres 1639.5
2172 Female, age 85, both hemispheres 1198.2
Nucleus raphe obscurus
nTPM: 2708.2
2142 Male, age 76, midline 3005.2
2800 Male, age 61, midline 2769.5
2845 Female, age 85, midline 2350.0
Nucleus raphe pallidus
nTPM: 2947.3
1924 Male, age 61, midline 4235.1
2145 Male, age 76, midline 2611.6
2183 Male, age 80, midline 1995.2
Nucleus tractus solitarii
nTPM: 1135.8
2656 Male, age 76, both hemispheres 1546.1
2191 Female, age 85, both hemispheres 1102.4
2307 Male, age 80, both hemispheres 973.8
2144 Female, age 91, right hemisphere 920.9
Paramedian reticular nucleus
nTPM: 1777.7
2057 Male, age 80, both hemispheres 2067.0
2050 Female, age 85, both hemispheres 1743.0
2313 Male, age 61, both hemispheres 1695.7
2052 Male, age 76, both hemispheres 1605.3
Parvicellular reticular nuclei
nTPM: 1833.8
2119 Male, age 80, both hemispheres 2200.9
2095 Male, age 76, both hemispheres 1901.3
2558 Male, age 74, both hemispheres 1399.3
Parvicellular reticular nuclei, medullary
nTPM: 1661.8
2189 Female, age 91, both hemispheres 1752.2
2091 Female, age 85, both hemispheres 1685.6
2181 Male, age 80, left hemisphere 1547.6
Pedunculopontine tegmental nucleus
nTPM: 1811.3
2334 Male, age 80, both hemispheres 1871.0
1921 Female, age 85, both hemispheres 1831.8
2338 Male, age 61, both hemispheres 1731.2
Peritrigeminal nucleus
nTPM: 2366.1
2179 Male, age 61, both hemispheres 2416.0
2067 Female, age 85, both hemispheres 2343.7
2136 Male, age 76, both hemispheres 2338.6
Pontine nuclei
nTPM: 1931.3
2115 Male, age 80, left hemisphere 2164.1
2319 Female, age 91, both hemispheres 2123.1
2454 Male, age 74, left hemisphere 2096.5
1863 Male, age 55, unknown 2028.6
1968 Male, age 76, left hemisphere 1918.8
2727 Male, age 61, right hemisphere 1793.2
2787 Female, age 85, both hemispheres 1728.9
2109 Female, age 72, unknown 1597.1
Pontine raphe nucleus
nTPM: 1644.1
2853 Male, age 76, midline 1787.0
2122 Female, age 85, midline 1501.2
Posteroventral cochlear nucleus
nTPM: 2149.9
2135 Female, age 91, both hemispheres 2586.0
2341 Male, age 80, both hemispheres 2251.8
2070 Male, age 76, both hemispheres 2144.6
2371 Male, age 61, both hemispheres 2087.1
2752 Female, age 85, both hemispheres 1679.8
Prepositus hypoglossal nucleus
nTPM: 1773.7
2855 Female, age 85, right hemisphere 1909.8
2086 Male, age 80, both hemispheres 1637.6
Principal sensory trigeminal nucleus
nTPM: 1893.1
2324 Male, age 76, both hemispheres 2185.4
2158 Male, age 61, both hemispheres 1932.5
2367 Female, age 91, left hemisphere 1904.4
2008 Male, age 80, left hemisphere 1550.1
Reticular pontine nucleus, caudal
nTPM: 1906.9
2092 Male, age 76, both hemispheres 2206.0
2457 Female, age 91, both hemispheres 2035.0
2559 Male, age 74, both hemispheres 1825.8
2332 Male, age 80, right hemisphere 1560.8
Reticular pontine nucleus, oral
nTPM: 2103.6
1939 Male, age 80, both hemispheres 2417.1
2366 Female, age 91, both hemispheres 2110.0
2167 Male, age 76, both hemispheres 2099.3
2361 Male, age 74, both hemispheres 1968.5
2012 Female, age 85, both hemispheres 1923.3
Reticulotegmental nucleus
nTPM: 1730.2
2333 Male, age 80, both hemispheres 2120.7
2322 Female, age 91, both hemispheres 1779.7
2452 Male, age 74, both hemispheres 1578.7
2325 Male, age 76, both hemispheres 1441.7
Spinal trigeminal nucleus, caudal
nTPM: 1955.7
2312 Male, age 61, both hemispheres 2557.7
2447 Male, age 76, both hemispheres 2105.3
2308 Male, age 80, both hemispheres 2094.3
2390 Female, age 91, both hemispheres 1613.1
2642 Male, age 74, both hemispheres 1408.2
Spinal trigeminal nucleus, interpolar
nTPM: 1837.3
2625 Male, age 61, both hemispheres 2441.3
2066 Male, age 76, right hemisphere 1741.5
2033 Male, age 80, both hemispheres 1737.7
2389 Female, age 91, both hemispheres 1693.7
2386 Female, age 85, both hemispheres 1572.5
Spinal trigeminal nucleus, oral
nTPM: 1757.3
1978 Male, age 76, both hemispheres 1882.3
2164 Male, age 80, both hemispheres 1797.1
2737 Female, age 85, both hemispheres 1592.7
Spinal vestibular nucleus
nTPM: 1919.5
2748 Male, age 76, both hemispheres 2248.4
2806 Female, age 85, both hemispheres 2092.2
2186 Female, age 91, both hemispheres 1946.7
2780 Male, age 80, both hemispheres 1885.2
2796 Male, age 61, both hemispheres 1869.8
2384 Male, age 74, both hemispheres 1474.9
Subcoeruleus area
nTPM: 1772.2
2369 Female, age 85, left hemisphere 2654.6
1958 Male, age 80, both hemispheres 1749.4
2089 Male, age 76, left hemisphere 1642.6
2323 Female, age 91, left hemisphere 1535.8
2451 Male, age 74, both hemispheres 1278.7
Superior olive
nTPM: 1927.6
2364 Male, age 74, right hemisphere 2362.9
2020 Male, age 76, both hemispheres 2145.3
2329 Male, age 80, right hemisphere 1813.3
2561 Female, age 91, both hemispheres 1786.2
1875 Female, age 85, both hemispheres 1530.3
Superior vestibular nucleus
nTPM: 1999.5
2061 Male, age 76, both hemispheres 2288.3
2015 Male, age 80, both hemispheres 1958.6
2383 Male, age 74, both hemispheres 1751.5
Ventral medullary reticular nucleus
nTPM: 2373.8
2372 Male, age 61, both hemispheres 2656.3
2060 Male, age 76, both hemispheres 2091.3
Ventral periolivary nuclei
nTPM: 1739.7
2023 Male, age 76, both hemispheres 2130.4
2165 Male, age 80, both hemispheres 1829.9
2130 Female, age 85, both hemispheres 1657.4
2794 Female, age 91, left hemisphere 1340.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 2204.0
2180 Male, age 61, both hemispheres 2794.2
1986 Male, age 76, both hemispheres 2209.1
2118 Male, age 80, both hemispheres 2123.9
2302 Female, age 91, both hemispheres 2026.4
2741 Female, age 85, both hemispheres 1866.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1852.9
2840 Female, age 85, both hemispheres 2065.2
1959 Male, age 76, both hemispheres 1940.3
2456 Female, age 91, both hemispheres 1869.7
2449 Male, age 74, both hemispheres 1846.6
2161 Male, age 80, both hemispheres 1824.2
2359 Male, age 61, both hemispheres 1571.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 5843.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 4936.7
FF:10182-103D2 60 years, female 6000.4
FF:10165-103B3 76 years, female 3873.1
Medulla oblongata
Scaled Tags Per Million: 5843.3
FF:10038-101F2 18-64 years, mixed 7315.3
FF:10155-103A2 76 years, female 5814.1
FF:10174-103C3 60 years, female 4400.5
Pons
Scaled Tags Per Million: 5577.0
FF:10033-101E6 18-54 years, mixed 5577.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 4362.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 4362.1
Samples: 4

Max nTPM: 4913.0
Min nTPM: 3817.3
Sample A Male 3975.0
Sample B Male 3817.3
Sample C Female 4743.2
Sample D Female 4913.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 9.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.9
851 Antisense, RP_Baylor_102986, Mouse strain C57BL/6J (56 days, male) 8.9
852 Antisense, RP_Baylor_102986, Mouse strain C57BL/6J (56 days, male) 7.2
Pons
Expression energy: 9.6
851 Antisense, RP_Baylor_102986, Mouse strain C57BL/6J (56 days, male) 9.6
852 Antisense, RP_Baylor_102986, Mouse strain C57BL/6J (56 days, male) 7.2

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