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MRPL51
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  • SUMMARY

  • TISSUE

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  • MRPL51
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:122.9 nTPM
FANTOM5:81.0 Scaled Tags Per Million
Pig:29.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA039923
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 122.9
Samples: 300

Max nTPM: 291.6
Min nTPM: 73.3
Std nTPM: 31.0
Median nTPM: 116.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 291.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 254.3
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 235.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 229.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 225.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 222.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 222.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 219.9
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 206.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 191.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 190.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 188.8
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 188.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 181.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 177.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 177.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 176.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 176.1
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 175.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 174.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 169.9
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 169.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 169.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 161.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 161.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 160.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 160.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 160.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 159.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 159.4
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 159.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 158.4
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 157.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 156.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 156.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 155.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 155.5
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 155.4
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 155.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 154.6
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 154.5
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 153.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 152.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 151.2
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 151.1
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 150.8
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 150.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 146.6
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 146.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 146.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 145.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 145.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 144.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 144.0
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 143.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 143.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 142.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 142.7
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 141.9
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 141.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 141.6
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 141.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 141.5
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 141.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 140.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 140.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 140.5
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 140.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 140.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 140.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 140.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 139.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 139.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 139.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 138.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 137.4
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 136.4
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 135.9
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 134.4
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 133.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 133.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 133.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 132.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 132.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 131.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 131.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 131.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 131.1
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 131.0
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 130.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 130.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 130.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 130.2
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 129.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 129.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 128.8
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 128.4
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 128.0
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 127.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 127.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 126.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 126.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 126.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 126.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 126.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 126.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 125.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 125.5
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 125.3
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 124.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 124.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 123.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 123.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 123.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 123.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 123.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 123.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 123.2
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 122.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 122.4
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 122.1
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 122.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 122.0
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 121.9
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 121.1
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 121.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 120.8
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 120.7
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 120.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 120.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 120.4
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 119.6
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 119.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 119.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 119.4
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 118.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 118.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 118.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 118.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 118.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 118.0
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 117.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 117.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 117.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 117.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 117.0
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 117.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 116.9
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 116.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 116.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 116.4
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 116.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 116.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 115.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 115.7
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 115.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 115.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 115.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 115.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 115.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 115.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 115.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 114.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 114.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 114.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 114.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 114.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 114.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 114.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 114.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 112.5
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 112.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 112.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 111.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 111.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 111.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 111.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 111.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 111.2
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 111.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 110.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 110.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 110.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 110.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 110.4
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 110.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 110.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 109.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 109.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 109.6
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 109.3
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 109.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 109.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 109.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 108.9
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 108.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 108.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 108.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 108.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 108.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 107.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 107.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 107.1
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 106.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 106.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 106.2
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 106.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 105.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 105.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 105.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 105.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 105.1
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 105.1
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 105.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 104.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 104.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 104.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 104.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 104.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 104.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 104.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 103.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 103.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 103.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 102.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 102.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 102.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 102.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 102.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 101.9
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 101.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 101.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 100.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 100.8
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 100.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 100.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 100.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 100.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 100.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 98.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 98.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 98.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 98.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 98.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 98.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 98.4
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 98.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 97.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 97.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 97.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 97.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 97.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 96.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 96.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 95.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 95.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 94.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 94.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 94.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 94.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 94.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 94.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 93.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 93.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 93.5
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 93.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 93.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 92.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 91.9
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 91.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 91.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 90.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 90.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 90.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 89.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 89.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 89.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 89.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 89.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 88.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 86.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 86.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 86.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 86.1
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 86.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 85.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 85.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 84.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 83.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 83.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 82.5
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 82.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 82.1
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 80.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 79.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 79.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 78.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 77.3
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 73.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

81.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 81.0
FF:10164-103B2 76 years, female 81.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.8
Pig sample Sample description nTPM
Caudate
nTPM: 29.8
Samples: 4

Max nTPM: 35.9
Min nTPM: 26.7
Sample A Female 29.7
Sample B Female 27.0
Sample C Male 35.9
Sample D Male 26.7

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