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MYL12B
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  • SUMMARY

  • TISSUE

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  • MYL12B
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:158.8 nTPM
FANTOM5:117.3 Scaled Tags Per Million
Pig:72.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA039262Antibody HPA045244Antibody HPA059197
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

158.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 158.8
Samples: 300

Max nTPM: 292.9
Min nTPM: 105.1
Std nTPM: 32.4
Median nTPM: 152.0
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 292.9
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 269.1
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 268.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 264.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 256.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 256.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 254.2
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 252.5
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 251.7
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 239.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 236.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 236.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 234.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 233.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 232.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 226.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 224.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 217.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 217.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 215.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 211.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 210.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 210.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 209.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 205.3
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 205.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 204.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 204.1
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 203.2
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 200.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 199.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 198.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 197.8
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 197.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 195.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 195.1
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 194.8
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 193.3
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 192.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 192.6
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 192.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 191.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 191.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 190.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 189.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 189.2
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 188.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 187.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 187.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 186.6
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 186.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 186.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 186.0
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 185.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 182.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 182.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 180.8
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 180.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 180.6
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 180.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 179.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 179.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 179.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 178.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 177.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 176.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 176.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 175.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 174.1
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 173.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 173.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 173.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 172.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 172.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 172.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 171.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 171.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 170.9
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 170.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 170.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 169.8
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 169.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 169.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 169.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 168.8
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 168.8
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 168.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 168.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 168.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 168.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 167.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 167.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 167.0
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 166.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 166.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 165.0
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 164.5
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 164.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 164.2
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 163.8
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 163.8
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 163.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 163.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 162.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 162.0
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 161.8
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 161.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 161.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 161.1
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 161.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 161.0
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 160.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 160.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 160.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 159.8
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 159.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 159.6
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 159.5
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 158.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 158.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 158.2
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 157.8
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 157.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 157.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 157.4
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 157.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 157.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 157.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 156.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 156.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 156.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 156.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 156.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 156.0
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 155.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 155.4
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 155.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 155.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 155.0
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 154.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 154.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 154.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 154.6
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 154.3
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 154.3
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 153.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 152.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 152.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 152.2
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 152.0
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 152.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 151.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 151.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 151.2
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 151.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 150.5
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 150.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 150.3
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 150.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 149.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 149.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 149.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 149.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 149.3
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 149.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 149.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 149.0
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 148.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 148.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 148.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 148.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 148.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 147.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 147.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 147.2
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 147.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 147.1
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 147.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 147.0
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 146.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 146.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 146.4
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 146.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 146.2
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 145.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 145.8
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 145.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 145.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 144.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 144.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 143.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 143.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 143.4
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 143.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 142.8
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 142.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 142.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 142.3
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 142.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 142.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 141.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 141.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 141.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 141.7
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 141.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 140.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 140.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 140.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 140.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 140.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 140.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 139.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 139.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 139.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 139.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 139.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 138.9
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 138.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 138.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 137.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 137.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 137.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 136.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 136.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 136.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 136.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 136.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 136.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 136.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 136.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 135.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 135.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 135.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 135.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 135.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 135.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 134.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 134.7
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 134.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 134.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 133.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 133.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 133.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 133.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 133.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 133.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 132.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 132.1
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 132.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 131.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 131.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 131.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 131.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 130.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 129.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 129.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 129.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 128.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 128.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 128.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 128.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 128.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 127.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 126.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 126.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 126.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 126.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 125.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 125.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 125.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 124.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 124.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 123.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 123.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 122.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 122.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 122.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 122.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 122.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 120.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 119.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 119.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 117.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 117.2
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 116.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 116.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 116.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 116.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 116.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 115.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 114.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 113.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 110.9
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 110.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 110.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 109.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 109.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 108.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 105.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

117.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 117.3
FF:10164-103B2 76 years, female 117.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.6
Pig sample Sample description nTPM
Caudate
nTPM: 72.6
Samples: 4

Max nTPM: 80.8
Min nTPM: 68.2
Sample A Female 68.2
Sample B Female 68.9
Sample C Male 80.8
Sample D Male 72.3

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