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  • TISSUE

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  • SPP1
TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
Tissue methods
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:219.6 nTPM
GTEx:404.7 nTPM
FANTOM5:901.8 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA027541
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

219.6
Sample id Sample description nTPM
Hippocampus
nTPM: 219.6
1898 Male, age 80, left hemisphere 303.1
2621 Female, age 67, right hemisphere 248.9
1855 Male, age 76, left hemisphere 225.8
2529 Female, age 94, left hemisphere 213.5
1911 Female, age 85, right hemisphere 184.5
2148 Female, age 91, left hemisphere 141.7

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

404.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 404.7
Samples: 255

Max nTPM: 2730.4
Min nTPM: 25.4
Std nTPM: 372.3
Median nTPM: 298.3
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 2730.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 2522.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 2216.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1885.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 1520.4
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 1512.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 1417.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 1274.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 1207.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 1161.0
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 1154.8
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 1118.9
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 1018.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 981.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 968.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 944.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 937.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 929.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 900.1
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 862.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 858.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 857.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 833.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 831.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 829.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 826.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 821.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 776.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 770.1
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 754.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 754.2
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 741.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 725.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 714.8
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 713.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 711.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 686.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 666.0
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 661.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 655.4
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 643.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 638.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 618.2
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 616.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 615.0
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 614.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 614.7
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 608.3
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 593.4
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 587.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 587.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 584.1
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 574.1
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 572.3
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 550.3
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 545.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 539.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 537.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 535.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 532.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 530.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 528.0
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 514.7
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 509.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 506.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 493.5
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 488.5
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 484.7
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 476.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 472.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 469.3
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 465.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 463.7
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 457.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 453.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 451.1
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 449.6
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 442.1
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 442.1
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 441.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 440.8
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 439.9
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 437.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 435.7
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 432.1
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 430.3
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 424.5
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 420.8
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 418.7
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 418.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 415.5
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 415.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 414.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 413.6
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 409.9
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 407.0
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 402.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 400.3
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 393.7
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 390.9
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 389.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 385.7
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 384.3
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 376.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 376.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 376.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 365.2
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 365.0
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 359.8
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 357.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 355.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 355.3
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 353.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 350.4
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 346.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 343.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 343.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 342.2
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 336.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 328.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 325.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 314.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 309.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 306.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 305.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 303.0
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 300.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 298.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 282.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 280.5
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 279.1
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 278.1
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 276.6
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 274.4
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 267.8
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 262.6
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 261.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 260.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 258.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 258.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 256.3
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 252.8
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 252.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 248.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 245.9
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 245.7
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 244.6
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 242.4
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 241.5
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 240.7
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 238.8
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 238.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 237.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 232.6
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 231.3
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 228.0
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 227.9
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 225.6
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 224.8
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 221.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 220.4
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 220.1
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 218.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 212.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 211.4
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 210.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 209.7
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 207.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 207.5
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 206.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 206.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 205.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 204.1
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 203.3
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 203.2
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 202.6
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 201.9
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 198.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 198.0
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 193.5
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 189.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 187.8
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 187.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 186.2
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 186.0
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 183.9
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 183.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 178.1
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 177.8
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 175.9
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 175.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 172.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 171.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 168.5
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 164.4
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 163.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 163.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 163.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 161.2
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 161.1
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 156.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 156.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 151.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 150.8
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 149.2
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 147.9
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 144.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 144.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 143.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 142.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 141.9
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 140.8
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 140.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 137.5
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 132.7
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 129.1
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 127.9
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 125.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 125.6
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 123.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 122.0
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 120.2
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 115.5
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 115.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 114.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 113.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 111.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 111.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 108.3
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 107.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 102.2
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 102.1
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 95.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 95.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 90.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 88.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 88.0
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 86.8
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 85.4
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 83.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 80.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 79.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 79.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 78.2
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 77.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 75.9
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 73.9
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 73.8
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 71.0
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 62.7
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 50.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 49.2
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 46.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 30.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 25.4
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HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

901.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 901.8
FF:10169-103B7 60 years, female 1118.5
FF:10153-102I9 76 years, female 685.2

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