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MORF4L2
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  • TISSUE

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  • BLOOD

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  • MORF4L2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:124.4 nTPM
FANTOM5:219.5 Scaled Tags Per Million
Pig:96.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA054102
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 124.4
Samples: 300

Max nTPM: 268.1
Min nTPM: 66.2
Std nTPM: 32.8
Median nTPM: 122.2
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 268.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 253.5
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 246.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 243.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 241.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 225.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 213.3
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 205.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 202.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 193.6
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 190.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 185.9
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 182.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 176.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 176.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 176.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 174.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 174.1
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 172.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 172.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 171.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 170.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 169.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 168.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 165.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 163.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 163.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 163.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 161.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 160.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 160.3
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 160.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 159.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 158.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 157.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 156.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 156.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 155.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 153.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 153.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 152.6
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 152.0
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 151.9
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 151.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 151.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 151.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 151.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 151.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 151.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 150.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 150.0
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 149.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 149.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 149.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 149.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 149.2
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 149.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 148.7
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 148.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 148.3
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 148.3
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 148.1
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 147.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 147.6
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 146.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 146.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 145.9
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 145.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 145.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 145.2
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 144.9
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 144.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 143.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 143.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 143.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 143.1
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 142.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 142.7
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 142.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 141.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 141.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 141.1
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 140.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 139.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 139.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 139.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 138.7
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 138.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 137.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 137.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 137.5
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 137.4
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 137.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 137.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 137.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 137.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 136.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 136.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 136.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 135.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 135.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 134.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 133.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 133.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 133.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 133.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 133.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 132.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 132.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 132.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 131.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 131.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 130.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 130.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 130.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 130.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 130.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 129.0
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 128.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 128.6
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 128.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 128.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 128.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 128.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 127.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 127.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 127.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 127.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 127.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 126.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 126.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 126.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 126.3
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 126.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 125.8
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 125.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 125.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 125.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 125.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 124.7
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 124.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 124.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 123.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 123.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 123.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 122.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 122.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 122.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 122.5
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 122.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 121.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 121.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 121.5
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 121.4
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 121.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 120.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 120.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 120.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 119.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 119.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 119.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 118.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 118.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 118.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 118.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 117.8
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 117.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 117.6
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 117.5
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 117.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 116.6
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 116.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 116.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 116.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 116.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 115.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 115.4
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 115.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 115.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 114.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 114.5
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 114.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 114.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 113.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 113.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 113.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 112.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 111.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 111.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 111.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 111.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 110.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 110.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 110.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 110.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 110.0
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 109.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 109.6
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 109.5
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 108.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 108.6
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 108.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 107.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 107.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 107.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 107.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 107.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 107.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 107.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 107.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 107.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 107.0
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 105.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 105.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 105.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 105.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 104.5
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 104.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 103.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 103.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 102.4
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 102.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 102.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 102.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 101.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 101.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 100.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 99.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 99.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 99.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 99.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 98.8
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 98.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 98.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 97.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 97.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 97.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 97.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 96.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 96.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 95.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 95.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 95.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 94.8
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 94.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 94.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 93.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 92.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 92.2
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 92.1
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 91.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 90.8
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 90.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 90.5
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 90.1
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 89.9
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 89.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 89.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 89.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 88.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 88.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 88.3
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 88.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 88.1
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 87.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 87.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 87.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 87.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 85.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 85.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 83.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 83.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 83.0
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 82.7
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 82.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 82.4
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 82.4
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 81.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 81.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 81.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 80.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 80.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 80.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 79.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 79.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 79.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 79.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 78.6
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 78.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 76.4
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 75.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 75.5
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 74.4
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 73.8
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 72.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 72.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 71.9
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 71.9
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 68.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 66.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

219.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 219.5
FF:10164-103B2 76 years, female 219.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.2
Pig sample Sample description nTPM
Caudate
nTPM: 96.2
Samples: 4

Max nTPM: 106.8
Min nTPM: 87.9
Sample A Female 106.8
Sample B Female 92.4
Sample C Male 97.8
Sample D Male 87.9

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