We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ADORA2A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • ADORA2A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: High
Synapses: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:84.5 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:184.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody CAB001943
Glial cells Not detected
Neuronal cells Medium
Neuronal projections High
Synapses High

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA075997
Glial cells Not detected
Neuronal cells Medium
Neuronal projections High
Synapses High

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA075997Antibody CAB001943
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 84.5
Samples: 300

Max nTPM: 221.4
Min nTPM: 4.4
Std nTPM: 47.4
Median nTPM: 77.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 221.4
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 220.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 207.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 201.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 200.7
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 200.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 185.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 185.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 184.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 182.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 180.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 179.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 175.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 174.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 173.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 172.6
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 171.5
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 171.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 170.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 169.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 168.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 168.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 163.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 163.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 160.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 160.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 159.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 159.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 155.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 155.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 155.1
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 151.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 150.4
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 149.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 148.0
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 145.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 144.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 142.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 140.6
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 140.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 140.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 139.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 138.6
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 138.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 137.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 136.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 136.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 135.8
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 135.3
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 134.4
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 133.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 133.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 133.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 131.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 131.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 129.5
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 129.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 127.9
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 127.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 123.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 123.2
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 121.9
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 121.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 120.6
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 119.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 119.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 118.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 117.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 117.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 117.1
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 115.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 114.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 114.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 114.1
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 112.8
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 112.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 112.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 111.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 110.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 110.0
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 109.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 109.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 108.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 108.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 107.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 107.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 107.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 107.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 106.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 106.4
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 105.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 105.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 105.2
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 105.0
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 104.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 104.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 103.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 103.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 102.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 101.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 101.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 100.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 100.8
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 100.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 99.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 98.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 98.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 97.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 97.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 97.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 96.6
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 96.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 95.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 95.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 95.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 94.9
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 94.7
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 92.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 92.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 92.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 91.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 91.2
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 90.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 88.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 88.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 87.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 87.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 87.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 86.3
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 86.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 86.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 85.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 85.2
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 84.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 84.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 82.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 82.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 82.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 82.1
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 81.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 80.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 80.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 80.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 79.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 79.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 79.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 79.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 78.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 77.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 77.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 77.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 76.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 76.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 76.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 76.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 76.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 75.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 75.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 74.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 74.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 74.5
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 73.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 73.5
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 73.3
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 71.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 71.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 70.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 70.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 70.3
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 70.1
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 69.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 69.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 69.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 69.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 68.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 68.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 67.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 66.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 66.2
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 65.7
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 65.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 65.0
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 64.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 64.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 64.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 64.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 64.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 63.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 63.6
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 63.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 62.9
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 62.8
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 62.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 62.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 61.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 61.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 61.2
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 61.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 60.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 59.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 59.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 59.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 59.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.3
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 59.2
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 59.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 58.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 58.7
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 58.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 58.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 58.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 56.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 56.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 55.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 55.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 54.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 54.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 54.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 54.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 53.4
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 53.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 52.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 51.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 51.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 49.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 48.8
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 47.7
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 47.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 46.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 45.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 44.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 43.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 43.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 42.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 42.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 41.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.2
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 40.6
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 39.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 38.6
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 37.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 37.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 37.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 36.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 36.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 36.3
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 35.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 34.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 34.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 33.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 33.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 32.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 32.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 31.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 30.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 30.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 30.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 30.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 29.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 29.9
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 29.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 29.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 29.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 29.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 29.3
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 28.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 28.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 28.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 26.6
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 25.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 24.5
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 24.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 23.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 22.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 21.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 21.0
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 20.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 20.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 19.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 19.6
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 18.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 16.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 16.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 14.9
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 14.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 13.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 13.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 13.1
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 10.6
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 9.7
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 7.7
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 6.9
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 6.1
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 5.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 5.0
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 4.4
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 32.1
FF:10164-103B2 76 years, female 32.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.0
Pig sample Sample description nTPM
Caudate
nTPM: 184.0
Samples: 4

Max nTPM: 251.7
Min nTPM: 114.7
Sample A Female 114.7
Sample B Female 194.5
Sample C Male 251.7
Sample D Male 175.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo