We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
GSTM5
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • GSTM5
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:95.8 nTPM
FANTOM5:104.9 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA055972Antibody HPA055973
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 95.8
Samples: 300

Max nTPM: 476.4
Min nTPM: 3.4
Std nTPM: 67.2
Median nTPM: 78.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 476.4
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 454.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 399.6
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 301.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 286.1
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 278.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 256.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 253.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 251.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 246.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 245.4
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 243.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 233.6
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 231.9
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 231.8
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 231.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 226.1
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 223.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 221.1
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 216.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 202.5
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 190.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 186.5
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 184.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 179.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 177.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 176.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 176.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 172.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 172.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 171.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 171.4
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 169.5
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 166.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 162.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 161.5
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 160.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 158.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 157.7
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 156.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 156.0
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 155.1
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 155.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 153.3
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 152.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 149.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 148.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 148.3
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 148.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 147.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 147.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 147.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 145.0
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 142.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 142.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 141.8
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 140.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 139.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 139.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 139.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 138.3
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 137.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 137.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 135.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 133.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 133.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 132.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 131.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 130.8
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 130.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 128.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 127.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 127.3
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 127.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 125.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 124.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 123.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 122.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 122.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 121.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 121.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 120.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 119.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 119.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 118.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 118.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 116.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 116.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 115.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 115.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 113.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 113.2
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 112.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 112.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 112.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 111.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 111.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 111.2
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 109.9
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 109.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 108.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 108.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 108.3
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 108.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 106.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 105.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 105.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 103.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 103.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 103.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 103.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 102.3
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 101.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 101.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 101.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 101.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 101.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 98.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 98.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 98.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 96.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 96.4
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 95.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 95.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 94.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 94.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 93.8
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 93.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 92.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 90.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 88.6
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 87.7
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 85.3
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 84.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 84.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 83.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 82.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 82.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 82.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 82.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 82.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 81.6
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 81.4
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 81.0
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 80.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 80.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 80.3
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 79.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 79.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 78.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 78.6
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 78.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 78.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 78.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 78.0
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 78.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 76.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 76.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 75.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 75.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 74.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 74.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 73.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 73.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 73.4
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 73.2
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 72.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 72.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 71.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 71.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 71.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 71.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 70.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 70.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 70.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 70.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 69.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 69.0
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 68.7
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 67.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 66.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 66.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 66.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 66.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 66.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 65.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 64.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 64.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 63.3
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 63.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 63.1
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 63.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 62.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 62.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 62.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 61.2
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 61.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 61.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 60.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 60.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 59.5
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 59.3
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 58.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 58.5
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 57.9
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 57.4
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 57.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 56.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 56.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 55.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 55.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 55.7
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 55.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 53.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 53.2
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 52.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 52.4
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 52.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.9
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 51.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 51.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 51.2
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 50.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 50.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 50.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 50.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 50.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 50.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 49.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 48.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 48.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 47.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 47.1
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 46.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 45.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 45.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 45.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 44.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 43.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 43.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 43.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 43.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 42.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 42.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 42.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 41.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 40.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 40.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 40.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 39.4
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 39.1
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 38.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 36.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.3
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 35.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 35.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 35.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 34.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 34.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 33.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 32.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 32.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 32.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 31.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 31.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 29.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 29.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 29.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 29.4
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 29.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 28.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 26.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 26.6
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 26.3
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 25.4
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 25.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 24.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 24.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 24.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 23.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 22.9
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 22.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 22.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 22.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 21.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 21.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 21.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 20.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 18.1
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 17.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 13.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 12.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 11.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 10.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 9.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 7.8
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 3.4
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

104.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 104.9
FF:10164-103B2 76 years, female 104.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo