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DNAJB2
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • DNAJB2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:135.5 nTPM
FANTOM5:198.8 Scaled Tags Per Million
Pig:90.9 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA036268
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 135.5
Samples: 300

Max nTPM: 336.8
Min nTPM: 54.7
Std nTPM: 35.8
Median nTPM: 128.3
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 336.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 311.1
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 306.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 243.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 231.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 228.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 226.9
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 225.5
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 220.0
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 215.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 213.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 213.6
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 211.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 203.4
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 196.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 196.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 195.2
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 193.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 191.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 189.0
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 187.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 186.8
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 184.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 184.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 182.9
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 182.6
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 182.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 181.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 180.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 180.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 177.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 175.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 171.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 170.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 169.9
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 169.6
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 169.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 168.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 168.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 167.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 167.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 167.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 166.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 165.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 164.8
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 164.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 163.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 163.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 163.6
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 162.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 161.8
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 159.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 159.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 159.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 158.7
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 158.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 157.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 157.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 157.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 157.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 156.7
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 156.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 156.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 155.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 155.4
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 154.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 154.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 154.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 153.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 153.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 153.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 153.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 152.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 152.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 152.0
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 151.9
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 151.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 150.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 149.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 149.6
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 149.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 149.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 148.7
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 148.5
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 148.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 148.1
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 147.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 147.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 147.0
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 146.8
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 146.1
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 145.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 145.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 145.0
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 144.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 144.4
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 144.4
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 144.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 144.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 144.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 144.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 143.8
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 143.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 143.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 142.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 142.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 142.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 142.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 142.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 141.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 141.5
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 141.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 141.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 141.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 140.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 140.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 140.6
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 140.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 139.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 138.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 138.6
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 138.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 138.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 137.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 137.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 137.5
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 136.5
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 136.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 135.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 135.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 135.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 134.8
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 134.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 134.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 132.2
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 131.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 131.5
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 131.5
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 131.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 130.9
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 130.4
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 130.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 130.2
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 130.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 129.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 129.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 129.3
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 129.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 128.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 128.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 128.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 127.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 127.8
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 127.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 127.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 126.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 126.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 126.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 126.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 126.1
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 125.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 125.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 125.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 125.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 124.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 124.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 124.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 124.3
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 124.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 123.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 123.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 123.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 123.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 122.8
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 122.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 122.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 122.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 122.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 122.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 122.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 121.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 120.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 120.8
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 120.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 120.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 120.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 120.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 119.2
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 119.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 118.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 118.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 118.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 118.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 118.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 117.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 117.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 117.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 117.1
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 117.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 116.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 116.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 116.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 116.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 116.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 116.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 116.2
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 115.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 115.1
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 115.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 114.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 114.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 114.7
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 114.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 114.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 114.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 114.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 114.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 114.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 113.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 113.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 113.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 113.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 112.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 112.9
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 112.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 112.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 111.6
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 111.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 111.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 111.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 110.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 109.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 109.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 109.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 109.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 108.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 108.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 108.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 108.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 108.1
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 108.1
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 108.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 108.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 107.4
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 107.4
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 107.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 107.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 106.9
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 106.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 106.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 106.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 105.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 105.7
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 105.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 105.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 104.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 103.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 103.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 103.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 102.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 102.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 102.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 101.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 101.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 101.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 101.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 101.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 100.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 100.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 100.2
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 99.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 99.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 98.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 98.6
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 98.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 98.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 98.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 97.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 95.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 94.4
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 94.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 93.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 93.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 92.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 91.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 91.4
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 89.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 88.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 88.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 87.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 86.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 86.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 85.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 83.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 79.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 78.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 75.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 74.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 54.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

198.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 198.8
FF:10164-103B2 76 years, female 198.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.9
Pig sample Sample description nTPM
Caudate
nTPM: 90.9
Samples: 4

Max nTPM: 99.2
Min nTPM: 83.7
Sample A Female 85.2
Sample B Female 95.5
Sample C Male 99.2
Sample D Male 83.7

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