We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ENPP2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • ENPP2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:60.2 nTPM
FANTOM5:83.6 Scaled Tags Per Million
Pig:66.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA023700
Glial cells Not detected
Neuronal cells Not detected


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 60.2
Samples: 300

Max nTPM: 259.9
Min nTPM: 12.9
Std nTPM: 34.3
Median nTPM: 50.3
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 259.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 180.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 176.0
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 165.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 156.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 155.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 154.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 147.0
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 143.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 138.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 138.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 134.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 129.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 123.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 121.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 120.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 120.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 116.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 115.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 114.9
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 113.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 112.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 110.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 110.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 109.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 109.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 109.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 108.7
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 107.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 106.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 106.0
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 105.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 105.2
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 103.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 103.1
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 100.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 100.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 99.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 99.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 99.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 99.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 99.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 99.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 98.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 96.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 96.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 96.2
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 95.9
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 94.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 93.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 93.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 92.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 92.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 92.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 90.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 89.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 89.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 87.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 86.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 86.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 86.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 86.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 86.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 85.3
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 85.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 85.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 84.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 83.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 83.2
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 82.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 81.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 80.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 80.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 79.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 79.7
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 79.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 78.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 78.3
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 78.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 78.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 77.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 77.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 76.3
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 75.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 74.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 73.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 73.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 73.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 72.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 72.5
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 72.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 72.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 71.8
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 71.7
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 71.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 69.3
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 69.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 68.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 68.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 67.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 67.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 67.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 67.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 66.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 66.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 64.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 63.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 63.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 62.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 62.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 62.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 61.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 61.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 61.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 60.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 60.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 59.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 58.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 58.5
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 58.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 58.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 58.4
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 58.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 58.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 58.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 57.6
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 57.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 57.4
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 56.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 55.5
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 54.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 54.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 53.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 53.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 53.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 53.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 53.0
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 52.8
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 52.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 52.5
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 52.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 51.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 51.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 51.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 51.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 50.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 50.6
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 50.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 50.4
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 50.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 50.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 49.9
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 49.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 49.1
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 49.0
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 48.9
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 48.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 48.2
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 48.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 47.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 47.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 47.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 46.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 46.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 46.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 46.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 45.9
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 45.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 45.2
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 44.7
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 44.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 44.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 44.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 43.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 43.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 43.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 43.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 42.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 42.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 41.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 41.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 41.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 41.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 41.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 41.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 41.3
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 41.1
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 40.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 40.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 40.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 40.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 40.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 39.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 39.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 39.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 38.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 38.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 38.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 38.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 38.6
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 38.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 37.7
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 37.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 37.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 37.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 36.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 36.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 36.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 36.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 36.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 36.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 35.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 35.7
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 35.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 35.5
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 35.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 35.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 35.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 35.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 35.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 34.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 34.9
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 34.8
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 34.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 34.6
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 34.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 34.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 34.3
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 34.2
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 34.2
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 34.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 33.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 33.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 33.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 33.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 33.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 33.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 32.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 32.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 32.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 31.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 31.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 31.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 31.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 31.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 31.1
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 31.1
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 30.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 30.8
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 30.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 30.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 30.3
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 30.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 30.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 29.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 29.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 29.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 29.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 28.8
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 28.8
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 28.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 28.6
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 28.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 28.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 28.5
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 28.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 27.8
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 27.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 27.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 27.1
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 26.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 26.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 26.5
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 26.4
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 26.2
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 26.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 25.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 25.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 24.5
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 24.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 24.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 23.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 23.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 22.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 22.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 22.3
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 21.5
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 20.6
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 20.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 19.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 19.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 19.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 18.4
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 18.1
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 17.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 16.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 12.9
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

83.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 83.6
FF:10164-103B2 76 years, female 83.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.6
Pig sample Sample description nTPM
Caudate
nTPM: 66.6
Samples: 4

Max nTPM: 98.7
Min nTPM: 51.8
Sample A Female 98.7
Sample B Female 51.8
Sample C Male 58.6
Sample D Male 57.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo