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RPL32
HPA
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  • SUMMARY

  • TISSUE

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  • SUBCELL

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  • BLOOD

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  • STRUCTURE

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  • RPL32
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:949.7 nTPM
FANTOM5:33.7 Scaled Tags Per Million
Pig:155.4 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA047501Antibody HPA051994
Glial cells Not detectedNot detected
Neuronal cells LowMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

949.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 949.7
Samples: 300

Max nTPM: 2774.7
Min nTPM: 503.1
Std nTPM: 296.2
Median nTPM: 908.2
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 2774.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2705.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2220.1
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 1884.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1862.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1832.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1822.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1712.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1691.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1690.5
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 1671.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1630.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1607.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1477.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1446.7
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 1420.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1389.9
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 1366.7
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 1361.2
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 1336.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1327.4
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 1324.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1320.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1319.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1290.3
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 1283.0
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 1279.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1279.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1278.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1268.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1261.2
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 1241.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1228.0
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 1224.9
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 1224.8
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 1221.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1220.6
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 1218.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1213.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1213.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1210.9
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 1203.9
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 1197.8
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 1186.0
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 1176.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1168.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1166.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1165.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1164.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1159.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1153.0
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 1151.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1150.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1149.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1140.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1123.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1120.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1118.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1107.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1101.1
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 1093.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1083.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1083.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1082.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1081.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1058.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1053.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1051.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1051.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1050.5
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 1048.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1045.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1043.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1043.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1043.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1041.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1038.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1034.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1034.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1033.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1032.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1031.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1031.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1030.9
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 1028.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1025.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1025.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1022.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1014.8
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 1014.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1006.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1005.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1001.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 999.1
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 995.6
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 994.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 992.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 992.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 992.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 991.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 987.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 984.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 983.4
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 982.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 975.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 973.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 971.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 970.7
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 968.5
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 967.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 967.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 965.6
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 963.8
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 961.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 959.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 959.0
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 958.8
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 957.9
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 957.2
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 954.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 953.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 952.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 946.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 939.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 939.0
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 938.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 938.1
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 937.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 934.5
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 933.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 932.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 932.0
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 925.1
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 924.6
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 924.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 922.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 921.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 921.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 921.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 920.6
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 918.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 917.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 916.9
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 915.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 915.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 915.0
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 914.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 913.9
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 912.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 908.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 908.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 908.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 907.1
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 906.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 906.4
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 902.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 901.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 900.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 897.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 897.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 897.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 895.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 892.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 890.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 889.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 888.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 884.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 883.5
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 881.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 880.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 875.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 875.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 874.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 868.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 867.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 867.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 865.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 865.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 862.0
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 859.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 858.9
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 855.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 855.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 852.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 851.3
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 847.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 847.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 842.3
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 841.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 833.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 828.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 826.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 825.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 825.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 822.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 821.8
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 817.1
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 814.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 811.6
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 811.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 808.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 807.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 807.5
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 806.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 806.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 806.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 805.4
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 801.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 799.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 797.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 795.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 793.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 792.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 790.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 787.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 786.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 783.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 782.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 779.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 775.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 769.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 769.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 769.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 768.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 764.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 762.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 759.3
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 754.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 752.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 750.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 750.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 750.5
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 747.8
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 747.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 747.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 743.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 743.8
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 737.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 735.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 735.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 732.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 732.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 728.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 722.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 718.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 717.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 716.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 715.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 709.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 704.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 701.2
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 700.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 699.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 698.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 695.6
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 695.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 693.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 692.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 691.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 688.5
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 687.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 686.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 682.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 681.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 681.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 679.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 674.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 673.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 662.3
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 661.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 658.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 654.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 654.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 652.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 651.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 650.7
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 649.7
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 646.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 641.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 638.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 637.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 630.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 628.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 624.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 613.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 601.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 596.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 595.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 587.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 582.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 578.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 574.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 562.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 533.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 529.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 528.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 524.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 521.5
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 505.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 503.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

33.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 33.7
FF:10164-103B2 76 years, female 33.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

155.4
Pig sample Sample description nTPM
Caudate
nTPM: 155.4
Samples: 4

Max nTPM: 170.3
Min nTPM: 133.6
Sample A Female 155.4
Sample B Female 162.1
Sample C Male 170.3
Sample D Male 133.6

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