We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CXCL16
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CXCL16
TISSUE PRIMARY DATA TESTIS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Testis
Tissue proteome
Testis
Tissue methods
TESTIS - Expression summary
Protein expression
Testisi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Elongated or late spermatids: High
Leydig cells: Not detected
Pachytene spermatocytes: Not detected
Peritubular cells: Not detected
Preleptotene spermatocytes: Not detected
Round or early spermatids: Not detected
Sertoli cells: Not detected
Spermatogonia cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Cytoplasmic staining mainly in late 2 and late 2/late 3 spermatids. Additional cytoplasmic staining in late 1 and late 3 spermatids.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:105.2 nTPM
HPA:35.1 nTPM
GTEx:105.2 nTPM
FANTOM5:169.6 Scaled Tags Per Million
TESTIS - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPERMATIDS - Multiplex stainingi

Antibody localization in the annotated cell types/states/structures of the current human tissue is reported as main/additional locations, percent overlap between the antibody and cell type/state/structure-specific markers, and, when applicable also subcellular localization. The scores are based on multiplex immunohistochemistry profiling in selected tissues.

Main locations are characterized by a high overlap between the antibody and the cell type/state-specific marker combined with strong antibody signal intensity, while additional locations are characterized by lower overlap and weaker antibody signal intensity.

The antibody of interest is reported in green, while cell types/states/structures are reported in various other colors, and DAPI (marks nucleus) is reported in blue. Colors can be toggled on and off by clicking on the name of the cell type/state of interest, “Antibody” or “DAPI”. To toggle between the different tissue samples, click on the miniature images at the right bottom corner of the main image. The miniature images appear upon hovering the mouse over that area.

- Antibody HPA066315
Main location Spermatids late 2
Spermatids late 2 & spermatids late 3
Additional location Spermatids late 1
Spermatids late 3
No antibody overlap
No antibody overlap
No antibody overlap
Antibody overlap75%-51%
LocationCytoplasmic
Antibody overlap>75%
LocationCytoplasmic
Antibody overlap>75%
LocationCytoplasmic
Antibody overlap75%-51%
LocationCytoplasmic
IMAGE ANALYSIS RESULTi

Tissue microarrays of human testis were stained using multiplex immunohistochemistry (mIHC) and scanned with a wide-field fluorescence scanner. Fluorescence images were exported and processed with a custom Python pipeline that segmented cells, quantified marker intensities, and classified cell phenotypes based on fluorescence signals. Candidate protein expression was segmented using a pixel-based classifier, and marker channels were automatically thresholded to define positive staining.

Segmentation accuracy was verified and adjusted as needed. Cell boundaries were identified using a pre-trained model, and mean fluorescence values for all candidate proteins were compiled and min-max normalized for downstream analysis.

Expression distributions at the single-cell level were visualized as violin plots showing scaled intensities across identified spermatogenic cell types and states.


TESTIS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA066315
Leydig cells Not detected
Elongated or late spermatids High
Pachytene spermatocytes Not detected
Peritubular cells Not detected
Preleptotene spermatocytes Not detected
Round or early spermatids Not detected
Sertoli cells Not detected
Spermatogonia cells Not detected



TESTIS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.1
overview
Male, age 56
Testis sample 244
nTPM: 18.3
Cell types%
Cells in seminiferous ducts:
65

Other cell types:
35

overview
Male, age 34
Testis sample 278
nTPM: 38.7
Cell types%
Cells in seminiferous ducts:
75

Other cell types:
25

overview
Male, age 62
Testis sample 279
nTPM: 24
Cell types%
Cells in seminiferous ducts:
70

Other cell types:
30

overview
Male, age 34
Testis sample 280
nTPM: 18.4
Cell types%
Cells in seminiferous ducts:
60

Other cell types:
40

overview
Male, age 26
Testis sample 281
nTPM: 53.8
Cell types%
Cells in seminiferous ducts:
55

Other cell types:
45

overview
Male, age 50
Testis sample 282
nTPM: 46.1
Cell types%
Cells in seminiferous ducts:
85

Other cell types:
15

overview
Male, age 37
Testis sample 283
nTPM: 30.8
Cell types%
Cells in seminiferous ducts:
35

Other cell types:
65

overview
Male, age 51
Testis sample 349
nTPM: 43.8
Cell types%
Cells in seminiferous ducts:
65

Other cell types:
35

overview
Male, age 34
Testis sample 354
nTPM: 30.6
Cell types%
Cells in seminiferous ducts:
70

Other cell types:
30

overview
Male, age 26
Testis sample 371
nTPM: 46.1
Cell types%
Cells in seminiferous ducts:
75

Other cell types:
25


TESTIS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.2
GTEx sample id Sample description nTPM
Testis
Average nTPM: 105.2
Samples: 414

Max nTPM: 311.2
Min nTPM: 3.7
Std nTPM: 52.3
Median nTPM: 107.6
GTEX-1HKZK-1926-SM-9WPPK 40-49 years, male 311.2
GTEX-1F75I-2326-SM-GA8YS 40-49 years, male 279.4
GTEX-1A3MX-1026-SM-731F8 60-69 years, male 268.0
GTEX-1C64N-2826-SM-7IGP5 50-59 years, male 243.0
GTEX-1LB8K-2326-SM-DHXJL 50-59 years, male 241.8
GTEX-QDVJ-0126-SM-F21IB 50-59 years, male 233.5
GTEX-T6MN-2026-SM-4DM7L 50-59 years, male 223.4
GTEX-16NFA-2026-SM-HAV35 50-59 years, male 217.5
GTEX-17HII-0126-SM-7KFSS 50-59 years, male 216.9
GTEX-1GPI7-1426-SM-9JGGR 20-29 years, male 207.0
GTEX-WK11-0326-SM-4M9QI 50-59 years, male 206.0
GTEX-1KWVE-1126-SM-DHXJY 30-39 years, male 204.8
GTEX-WQUQ-0326-SM-EWRM7 60-69 years, male 197.9
GTEX-17KNJ-1126-SM-7KFT6 50-59 years, male 197.8
GTEX-RVPV-1126-SM-EAZAV 60-69 years, male 194.7
GTEX-11WQC-2326-SM-5EQKE 60-69 years, male 194.5
GTEX-Y111-2426-SM-4TT23 50-59 years, male 190.2
GTEX-1HCU7-2926-SM-GA91J 50-59 years, male 189.8
GTEX-17MF6-2726-SM-7IGMZ 40-49 years, male 186.4
GTEX-1MUQO-2026-SM-HK78N 60-69 years, male 185.7
GTEX-OOBK-2126-SM-3LK5T 40-49 years, male 185.1
GTEX-XAJ8-1326-SM-47JYT 40-49 years, male 184.8
GTEX-N7MS-0126-SM-3TW8O 60-69 years, male 184.1
GTEX-OHPM-2126-SM-3LK75 50-59 years, male 183.3
GTEX-QEG4-0126-SM-48TZE 30-39 years, male 181.4
GTEX-15G19-1326-SM-6LPIR 60-69 years, male 180.4
GTEX-1C6VR-1526-SM-7MKG9 60-69 years, male 176.2
GTEX-13FHP-2826-SM-5IJFW 50-59 years, male 175.1
GTEX-1EU9M-1626-SM-7EWF2 60-69 years, male 174.5
GTEX-Q2AI-1226-SM-48U14 40-49 years, male 174.5
GTEX-1R7EU-1726-SM-DTX9M 60-69 years, male 173.5
GTEX-1I6K7-2426-SM-AHZ2I 40-49 years, male 173.3
GTEX-1N2EF-1126-SM-HK78G 60-69 years, male 173.2
GTEX-1MCQQ-2326-SM-DLHBX 60-69 years, male 173.1
GTEX-11ZUS-2726-SM-5FQUA 30-39 years, male 173.0
GTEX-1PIIG-0526-SM-E6CQM 30-39 years, male 172.1
GTEX-11TUW-2226-SM-5EQL9 60-69 years, male 171.9
GTEX-1IKJJ-2126-SM-C1YQU 60-69 years, male 171.9
GTEX-S7PM-0626-SM-4AD4Q 60-69 years, male 171.6
GTEX-1H11D-1626-SM-9JGHM 40-49 years, male 171.1
GTEX-1GMRU-0626-SM-7MKH2 50-59 years, male 170.9
GTEX-12WSH-0326-SM-5GCNH 50-59 years, male 170.5
GTEX-1S5ZA-1726-SM-HLJR2 20-29 years, male 168.9
GTEX-1GF9W-2126-SM-7MXUX 60-69 years, male 168.5
GTEX-12WSL-2326-SM-5DUXQ 50-59 years, male 166.6
GTEX-11EQ8-1426-SM-5EGJR 60-69 years, male 166.5
GTEX-SNOS-1126-SM-4DM67 40-49 years, male 166.5
GTEX-ZAB5-2426-SM-5CVMW 50-59 years, male 165.8
GTEX-139TS-1726-SM-5IJG5 60-69 years, male 165.0
GTEX-YEC3-1726-SM-5IFIK 50-59 years, male 164.5
GTEX-1RB15-1926-SM-EV79J 60-69 years, male 162.1
GTEX-1RAZS-1926-SM-F2I27 50-59 years, male 162.0
GTEX-117YW-1526-SM-5EGGP 50-59 years, male 160.1
GTEX-WYJK-1826-SM-4ONDM 50-59 years, male 159.4
GTEX-139TU-2726-SM-HK7AI 60-69 years, male 158.2
GTEX-WH7G-1926-SM-4LVMM 40-49 years, male 157.5
GTEX-ZQUD-2026-SM-51MSM 30-39 years, male 156.9
GTEX-TKQ2-1526-SM-4DXUN 50-59 years, male 156.6
GTEX-1H4P4-1926-SM-9WPOO 50-59 years, male 156.5
GTEX-14ABY-0626-SM-5Q5C9 50-59 years, male 156.2
GTEX-1IDJH-2326-SM-D4P2K 70-79 years, male 155.0
GTEX-16NPX-0126-SM-HAV2V 50-59 years, male 154.7
GTEX-1C4CL-1926-SM-731DY 30-39 years, male 154.1
GTEX-1KD4Q-2126-SM-EV7A6 40-49 years, male 153.6
GTEX-11EQ9-1926-SM-5PNVV 30-39 years, male 153.5
GTEX-13OW5-2526-SM-5L3I1 60-69 years, male 152.7
GTEX-WOFM-1126-SM-4M9QN 20-29 years, male 152.6
GTEX-1JMLX-0726-SM-AHZ3M 50-59 years, male 151.8
GTEX-PW2O-1426-SM-48TCD 20-29 years, male 151.6
GTEX-13112-0226-SM-5P9IV 50-59 years, male 150.7
GTEX-S4Q7-1226-SM-4AD5I 20-29 years, male 149.9
GTEX-OIZG-0126-SM-E9TI2 50-59 years, male 149.5
GTEX-117XS-2026-SM-5GID1 60-69 years, male 149.3
GTEX-Z93S-1726-SM-5HL8G 50-59 years, male 148.8
GTEX-12WSC-2726-SM-HLJQW 50-59 years, male 148.6
GTEX-13NZA-2526-SM-5IJFX 60-69 years, male 148.3
GTEX-11GS4-2026-SM-5N9CP 60-69 years, male 147.9
GTEX-17GQL-1726-SM-718B8 60-69 years, male 147.3
GTEX-U8XE-0126-SM-4E3I3 30-39 years, male 146.8
GTEX-S95S-1126-SM-4B64E 60-69 years, male 146.6
GTEX-RUSQ-2126-SM-47JXK 50-59 years, male 146.5
GTEX-11OF3-1826-SM-5987N 60-69 years, male 146.3
GTEX-REY6-0126-SM-48FDT 60-69 years, male 145.6
GTEX-144GL-0726-SM-5LU4P 50-59 years, male 145.3
GTEX-14C39-0526-SM-664OF 40-49 years, male 145.2
GTEX-1MJK2-1326-SM-EV7A4 50-59 years, male 144.8
GTEX-13N1W-2626-SM-5IJEP 70-79 years, male 144.7
GTEX-13FLV-2726-SM-5IFET 50-59 years, male 144.5
GTEX-1B8L1-2326-SM-9JGGA 60-69 years, male 144.2
GTEX-11NV4-1726-SM-5N9FC 60-69 years, male 143.7
GTEX-V955-1926-SM-4KL1L 60-69 years, male 143.6
GTEX-14PJ2-2026-SM-6AJAQ 50-59 years, male 143.1
GTEX-17HHY-0726-SM-7IGM6 50-59 years, male 143.1
GTEX-13OVL-0426-SM-5IFG6 50-59 years, male 143.0
GTEX-18A66-0726-SM-72D77 60-69 years, male 142.4
GTEX-11DXZ-2126-SM-59881 50-59 years, male 142.2
GTEX-1I1GR-2726-SM-GA8ZF 60-69 years, male 142.2
GTEX-UPJH-0126-SM-4IHLL 50-59 years, male 142.2
GTEX-QV31-1126-SM-CKZNA 30-39 years, male 142.0
GTEX-1OKEX-1926-SM-E6CP7 60-69 years, male 141.4
GTEX-U8T8-1126-SM-4DXUE 60-69 years, male 141.2
GTEX-139UW-1926-SM-HLJQX 60-69 years, male 140.7
GTEX-14DAR-1126-SM-5P9FG 50-59 years, male 139.9
GTEX-OIZF-2126-SM-7P8R2 60-69 years, male 139.9
GTEX-ZTTD-2226-SM-HAUYK 50-59 years, male 139.8
GTEX-15SZO-0726-SM-HLJRR 50-59 years, male 139.4
GTEX-1EKGG-2726-SM-79OOD 60-69 years, male 139.3
GTEX-1PBJJ-1726-SM-HLJQN 30-39 years, male 138.9
GTEX-OXRL-2126-SM-3NM98 50-59 years, male 138.9
GTEX-1KANB-2126-SM-DHXJV 50-59 years, male 138.8
GTEX-1C64O-2126-SM-7IGPB 60-69 years, male 138.5
GTEX-YJ8A-2226-SM-H7OFM 20-29 years, male 138.4
GTEX-1A3MV-0726-SM-72D5M 30-39 years, male 138.2
GTEX-1CB4F-2126-SM-7MXUL 60-69 years, male 137.9
GTEX-1ICLY-2926-SM-C1YS5 50-59 years, male 137.6
GTEX-QEG5-0126-SM-CMKFD 20-29 years, male 136.7
GTEX-1IOXB-1526-SM-A96T6 50-59 years, male 135.4
GTEX-R55D-0126-SM-48FEL 50-59 years, male 135.3
GTEX-ZVTK-0126-SM-57WDG 20-29 years, male 134.9
GTEX-PVOW-2126-SM-EZ6LN 40-49 years, male 134.7
GTEX-1MA7X-1526-SM-DHXJF 60-69 years, male 134.1
GTEX-ZPU1-2126-SM-57WED 40-49 years, male 133.3
GTEX-WHSE-0426-SM-4M1XO 20-29 years, male 132.8
GTEX-1B8SF-2926-SM-731DL 60-69 years, male 132.3
GTEX-144GM-0426-SM-5Q5C8 20-29 years, male 132.2
GTEX-1GN2E-0126-SM-9OSW8 60-69 years, male 131.8
GTEX-ZUA1-2726-SM-59HLJ 40-49 years, male 131.3
GTEX-14ICK-2326-SM-H7OFR 40-49 years, male 131.2
GTEX-ZTSS-1526-SM-51MTC 40-49 years, male 131.0
GTEX-1L5NE-1626-SM-DHXKW 50-59 years, male 130.3
GTEX-1I6K6-2226-SM-GA8ZJ 30-39 years, male 129.1
GTEX-XLM4-1526-SM-4AT6D 60-69 years, male 128.9
GTEX-12ZZY-0126-SM-5LZV2 60-69 years, male 128.8
GTEX-11P82-1526-SM-5BC5M 20-29 years, male 128.1
GTEX-1QMI2-2826-SM-DPRXR 60-69 years, male 128.1
GTEX-12WSE-0126-SM-HLJQY 20-29 years, male 127.0
GTEX-14C38-0126-SM-5YY9V 50-59 years, male 126.8
GTEX-13111-1526-SM-5EGJX 50-59 years, male 126.7
GTEX-131XE-0426-SM-5IJF4 50-59 years, male 126.2
GTEX-1LBAC-1826-SM-D3L9X 20-29 years, male 125.8
GTEX-111FC-1926-SM-5GZYC 60-69 years, male 125.5
GTEX-XQ3S-2726-SM-4BOP2 20-29 years, male 125.2
GTEX-14PHX-1426-SM-69LPP 50-59 years, male 125.0
GTEX-ZU9S-2426-SM-HLJQV 30-39 years, male 125.0
GTEX-QLQW-1026-SM-447A9 30-39 years, male 124.3
GTEX-13O1R-0726-SM-5IJEI 60-69 years, male 124.2
GTEX-1GF9V-0626-SM-7MXU1 60-69 years, male 124.2
GTEX-ZZ64-1126-SM-5GZXY 20-29 years, male 123.7
GTEX-1339X-1926-SM-5PNVP 40-49 years, male 123.6
GTEX-11O72-0726-SM-5P9GO 40-49 years, male 123.3
GTEX-1HSEH-0726-SM-B2LXD 60-69 years, male 122.8
GTEX-16AAH-1626-SM-7EWE2 50-59 years, male 122.7
GTEX-13NZB-2026-SM-5MR4M 30-39 years, male 122.3
GTEX-T8EM-0126-SM-4DM5R 40-49 years, male 122.3
GTEX-1EN7A-2226-SM-7MXU6 40-49 years, male 122.0
GTEX-1CB4G-2426-SM-7DUGM 60-69 years, male 121.6
GTEX-1RAZA-2126-SM-EVR4A 20-29 years, male 121.6
GTEX-T5JC-0726-SM-4DM55 20-29 years, male 121.5
GTEX-1HCVE-2826-SM-9WPPI 50-59 years, male 121.4
GTEX-16Z82-2726-SM-7KULV 60-69 years, male 120.9
GTEX-16XZY-1926-SM-H6Q7D 70-79 years, male 120.7
GTEX-ZDYS-1326-SM-5IJFF 50-59 years, male 120.2
GTEX-1RQED-1626-SM-EAZ55 60-69 years, male 120.1
GTEX-11NUK-2626-SM-5A5MB 50-59 years, male 119.0
GTEX-17F9E-1626-SM-7EWDB 50-59 years, male 119.0
GTEX-111VG-1926-SM-5GIDO 60-69 years, male 118.2
GTEX-11TT1-2226-SM-5GU6B 20-29 years, male 117.9
GTEX-TKQ1-0926-SM-4DXU2 30-39 years, male 117.7
GTEX-1GTWX-2226-SM-9JGHD 60-69 years, male 117.6
GTEX-1I1GV-2526-SM-B2LXL 60-69 years, male 117.1
GTEX-1PIGE-1626-SM-DPRZE 20-29 years, male 116.8
GTEX-ZYT6-2726-SM-5GICP 30-39 years, male 116.7
GTEX-145MO-0126-SM-5S2QU 60-69 years, male 116.6
GTEX-1J1R8-1326-SM-CE6TC 40-49 years, male 116.5
GTEX-1RAZR-2226-SM-E6CRG 40-49 years, male 116.5
GTEX-12696-0226-SM-5EGL3 60-69 years, male 116.3
GTEX-14BIL-2226-SM-5P9I4 50-59 years, male 116.2
GTEX-1I1GQ-2826-SM-GA8YE 50-59 years, male 116.1
GTEX-12C56-1426-SM-5FQSW 20-29 years, male 115.9
GTEX-1JMQJ-0726-SM-CXZJJ 50-59 years, male 115.9
GTEX-11NSD-1026-SM-5N9BE 20-29 years, male 115.3
GTEX-X5EB-2026-SM-4E3KA 40-49 years, male 115.0
GTEX-14E1K-1926-SM-5P9FN 50-59 years, male 114.2
GTEX-1IY9M-2526-SM-C1YQF 60-69 years, male 113.9
GTEX-QXCU-0426-SM-HLJRH 50-59 years, male 113.9
GTEX-15RIF-1826-SM-6M469 20-29 years, male 113.4
GTEX-ZVP2-1026-SM-59HKF 50-59 years, male 113.4
GTEX-1HUB1-2026-SM-A96S8 60-69 years, male 113.3
GTEX-183FY-1926-SM-7KFRI 20-29 years, male 112.9
GTEX-OIZH-2126-SM-3NB1P 50-59 years, male 112.9
GTEX-13O21-1226-SM-5J2MK 50-59 years, male 112.5
GTEX-17EVP-2426-SM-7IGNK 40-49 years, male 112.3
GTEX-13FLW-2126-SM-5N9FD 50-59 years, male 111.7
GTEX-1S5VW-2626-SM-EVR4W 60-69 years, male 111.6
GTEX-18A6Q-2626-SM-7KFT3 60-69 years, male 111.3
GTEX-ZVZP-2226-SM-57WBF 50-59 years, male 111.3
GTEX-1LVA9-2826-SM-EAZ5D 50-59 years, male 111.2
GTEX-11LCK-2326-SM-5HL53 30-39 years, male 110.5
GTEX-12WSI-2126-SM-5GCMV 50-59 years, male 110.5
GTEX-WHSB-2126-SM-4M1XF 50-59 years, male 110.1
GTEX-144GN-1626-SM-5Q5BU 50-59 years, male 109.5
GTEX-WZTO-0326-SM-4PQYZ 40-49 years, male 108.8
GTEX-17EUY-0926-SM-H7OFW 20-29 years, male 108.7
GTEX-18D9B-2726-SM-72D73 60-69 years, male 108.6
GTEX-U4B1-1526-SM-4DXSL 40-49 years, male 108.2
GTEX-Y5V6-1726-SM-4VDSZ 60-69 years, male 108.1
GTEX-1PDJ9-1426-SM-DPRYW 20-29 years, male 107.6
GTEX-ZA64-1626-SM-5CVME 20-29 years, male 107.6
GTEX-WHWD-1926-SM-HAUYB 50-59 years, male 107.5
GTEX-15SHV-1926-SM-6LPI1 60-69 years, male 107.4
GTEX-V1D1-2126-SM-4JBH4 50-59 years, male 107.4
GTEX-OOBJ-2126-SM-3NB1N 60-69 years, male 106.7
GTEX-14PJ3-1626-SM-664O5 50-59 years, male 106.3
GTEX-RWSA-2426-SM-47JXR 40-49 years, male 106.1
GTEX-1R9K5-2326-SM-DPRZC 50-59 years, male 105.8
GTEX-X3Y1-2626-SM-4PQZI 40-49 years, male 105.8
GTEX-111YS-2026-SM-5EGGL 60-69 years, male 105.5
GTEX-13OVK-2226-SM-6LPJY 40-49 years, male 105.1
GTEX-1MGNQ-1426-SM-HLJQH 40-49 years, male 104.6
GTEX-1F75A-2826-SM-7MXTS 50-59 years, male 103.9
GTEX-1PPGY-0726-SM-EXOJ7 60-69 years, male 103.7
GTEX-11EI6-2226-SM-5EGJM 60-69 years, male 103.2
GTEX-ZT9X-1426-SM-5DUX1 40-49 years, male 103.1
GTEX-ZT9W-2226-SM-57WFU 50-59 years, male 102.5
GTEX-1RAZQ-1126-SM-EAZ4S 30-39 years, male 101.3
GTEX-15RIE-0626-SM-6M47G 60-69 years, male 101.0
GTEX-1I1GU-0726-SM-ARU7H 40-49 years, male 100.9
GTEX-1B996-2326-SM-731EC 60-69 years, male 100.6
GTEX-1O97I-2426-SM-DPRZ2 60-69 years, male 100.4
GTEX-XGQ4-2026-SM-4AT6G 50-59 years, male 100.3
GTEX-1RQEC-1326-SM-HLJQR 60-69 years, male 100.0
GTEX-1OJC3-2026-SM-F2I25 20-29 years, male 99.6
GTEX-S3XE-1526-SM-4AD5A 50-59 years, male 99.6
GTEX-XBEC-0126-SM-4GIDT 50-59 years, male 98.7
GTEX-13N2G-0126-SM-5N9DV 60-69 years, male 98.6
GTEX-16XZZ-0626-SM-6M47T 60-69 years, male 98.5
GTEX-1EMGI-0626-SM-7MXUS 60-69 years, male 98.4
GTEX-1QP2A-1626-SM-E6CPO 50-59 years, male 98.4
GTEX-16YQH-1826-SM-6LPJW 30-39 years, male 97.9
GTEX-1AX9J-1226-SM-72D6P 60-69 years, male 97.7
GTEX-U3ZM-1626-SM-4DXSK 40-49 years, male 97.7
GTEX-14753-0626-SM-5Q5CY 60-69 years, male 97.6
GTEX-1K2DU-2226-SM-CXZJY 20-29 years, male 97.5
GTEX-1LG7Y-2326-SM-EVR56 50-59 years, male 97.4
GTEX-XMK1-2026-SM-4B65K 40-49 years, male 97.0
GTEX-1S83E-1926-SM-HLJQ3 40-49 years, male 96.7
GTEX-XBED-2026-SM-4AT5D 60-69 years, male 96.5
GTEX-15UF7-0326-SM-HAV1P 40-49 years, male 96.4
GTEX-1IL2U-0126-SM-CNPQ5 60-69 years, male 96.4
GTEX-13VXU-0726-SM-5J2O7 50-59 years, male 96.3
GTEX-111CU-1726-SM-5EGHM 50-59 years, male 95.4
GTEX-1NSGN-2526-SM-HK78H 50-59 years, male 95.4
GTEX-SNMC-1026-SM-4DM7K 20-29 years, male 95.3
GTEX-R55C-1426-SM-48FED 40-49 years, male 95.2
GTEX-139T6-1226-SM-5IFFC 50-59 years, male 95.0
GTEX-XBEW-1226-SM-EY5XE 40-49 years, male 95.0
GTEX-1B8KE-1426-SM-7EWEL 50-59 years, male 94.2
GTEX-11GSO-1826-SM-HAV2L 60-69 years, male 94.0
GTEX-1497J-1426-SM-HLJRQ 60-69 years, male 93.4
GTEX-Q2AH-1526-SM-48TZG 40-49 years, male 92.3
GTEX-18465-1526-SM-7KFTV 50-59 years, male 92.0
GTEX-1212Z-0326-SM-5FQSJ 60-69 years, male 91.0
GTEX-14E6E-1026-SM-664N9 30-39 years, male 91.0
GTEX-1JN6P-2826-SM-CXZJK 60-69 years, male 90.7
GTEX-17HGU-0726-SM-7DUFN 50-59 years, male 90.4
GTEX-WVLH-2626-SM-4MVNV 50-59 years, male 90.4
GTEX-132QS-1226-SM-5P9GD 60-69 years, male 90.2
GTEX-XPT6-1626-SM-4B655 20-29 years, male 90.0
GTEX-1M4P7-2526-SM-GQ1DM 60-69 years, male 89.7
GTEX-1F6IF-0526-SM-7MKHD 60-69 years, male 89.3
GTEX-1M5QR-2626-SM-EV7AV 40-49 years, male 89.3
GTEX-S7SE-0326-SM-4AT5Q 50-59 years, male 89.2
GTEX-13FTW-1326-SM-5LZZD 40-49 years, male 89.0
GTEX-139TT-2226-SM-5LZWO 60-69 years, male 88.9
GTEX-1HBPN-2226-SM-9WPNR 50-59 years, male 88.7
GTEX-18A7B-1526-SM-7KFTH 70-79 years, male 87.7
GTEX-P4QS-2126-SM-3NMCF 60-69 years, male 87.5
GTEX-18QFQ-1926-SM-72D5H 30-39 years, male 87.1
GTEX-1BAJH-0726-SM-7IGMF 70-79 years, male 86.8
GTEX-17HHE-1226-SM-793C6 50-59 years, male 85.3
GTEX-1I1GS-1826-SM-C1YS8 60-69 years, male 85.3
GTEX-X261-2326-SM-4PQYU 50-59 years, male 84.9
GTEX-16MTA-1126-SM-6LPJA 50-59 years, male 84.4
GTEX-OIZI-0126-SM-3NB13 40-49 years, male 83.3
GTEX-YF7O-2026-SM-4W1YE 50-59 years, male 82.7
GTEX-1AX9I-1826-SM-72D5I 60-69 years, male 82.0
GTEX-147GR-0626-SM-5S2PK 60-69 years, male 81.9
GTEX-Y8E4-2226-SM-5LU94 40-49 years, male 81.9
GTEX-YEC4-1526-SM-4W1YU 40-49 years, male 80.6
GTEX-1F6I4-1426-SM-7MXU3 60-69 years, male 79.9
GTEX-13O61-2026-SM-5J2M6 60-69 years, male 79.8
GTEX-14C5O-2326-SM-5P9FB 60-69 years, male 79.8
GTEX-1JJEA-1926-SM-AHZ41 60-69 years, male 79.7
GTEX-1N2EE-0826-SM-E6CRI 60-69 years, male 79.7
GTEX-147JS-0126-SM-5S2TW 60-69 years, male 79.4
GTEX-SUCS-1326-SM-4DM5T 70-79 years, male 79.2
GTEX-17MFQ-0826-SM-793C8 20-29 years, male 78.9
GTEX-147F4-0626-SM-5LUAK 50-59 years, male 78.4
GTEX-1QP9N-1326-SM-DPRZN 30-39 years, male 78.3
GTEX-14E7W-0726-SM-664OK 70-79 years, male 77.4
GTEX-XPVG-2226-SM-4B65U 50-59 years, male 77.2
GTEX-QV44-1726-SM-4R1KG 50-59 years, male 77.1
GTEX-QMRM-1526-SM-4R1K6 50-59 years, male 76.9
GTEX-1N2DV-1126-SM-HK79P 40-49 years, male 76.5
GTEX-1S831-2026-SM-EXOJP 20-29 years, male 76.4
GTEX-1399R-1626-SM-5P9GG 30-39 years, male 76.2
GTEX-14PJ4-1726-SM-664OC 60-69 years, male 74.5
GTEX-RM2N-1326-SM-48FCW 50-59 years, male 74.5
GTEX-1E1VI-1026-SM-7MKGQ 50-59 years, male 74.0
GTEX-1JK1U-0726-SM-C1YPZ 60-69 years, male 74.0
GTEX-Y9LG-1726-SM-4VBQE 30-39 years, male 73.9
GTEX-145MH-2326-SM-5O9AW 50-59 years, male 73.6
GTEX-YB5E-1926-SM-5IFIG 40-49 years, male 73.3
GTEX-1H1E6-0626-SM-9OSWF 30-39 years, male 73.2
GTEX-1GN1V-1826-SM-9JGGD 60-69 years, male 72.7
GTEX-11WQK-2826-SM-5EQKH 50-59 years, male 71.7
GTEX-ZV7C-2026-SM-5NQ8F 50-59 years, male 71.2
GTEX-13NYB-2226-SM-5MR58 40-49 years, male 70.0
GTEX-WFG8-1926-SM-4LVM1 20-29 years, male 69.4
GTEX-15RJ7-1826-SM-7KUMJ 40-49 years, male 68.7
GTEX-VJYA-1426-SM-4KL1Y 60-69 years, male 67.9
GTEX-R55E-0726-SM-48FCZ 20-29 years, male 66.8
GTEX-1HSMO-2426-SM-A9G24 60-69 years, male 64.0
GTEX-13OVH-0726-SM-5N9BU 70-79 years, male 63.0
GTEX-14B4R-1026-SM-5TDDS 30-39 years, male 62.5
GTEX-WFON-2026-SM-4LVMW 40-49 years, male 61.9
GTEX-11P7K-1026-SM-5HL6Y 30-39 years, male 61.1
GTEX-ZYFC-0126-SM-5GIEH 50-59 years, male 61.0
GTEX-WHPG-2026-SM-F21IT 50-59 years, male 60.7
GTEX-1GZ4I-2726-SM-9JGG9 50-59 years, male 60.4
GTEX-U3ZH-1526-SM-4DXV1 30-39 years, male 59.0
GTEX-1GMR3-1726-SM-9JGGQ 40-49 years, male 58.1
GTEX-YJ89-0626-SM-4TT3Z 60-69 years, male 57.8
GTEX-1399Q-2826-SM-5IJEZ 40-49 years, male 57.6
GTEX-1IDJF-2226-SM-AHZ2T 20-29 years, male 57.3
GTEX-1KANA-1626-SM-CXZL2 20-29 years, male 56.7
GTEX-1HSMQ-1726-SM-B2LXZ 50-59 years, male 56.3
GTEX-O5YT-2126-SM-G8W7R 20-29 years, male 55.8
GTEX-ZAB4-0126-SM-5CVMG 40-49 years, male 55.7
GTEX-11ONC-2226-SM-5HL6D 60-69 years, male 54.8
GTEX-ZTX8-1126-SM-51MRM 20-29 years, male 54.8
GTEX-145LT-0426-SM-5LUAP 40-49 years, male 54.1
GTEX-1LSVX-2126-SM-EV7A9 60-69 years, male 53.1
GTEX-QLQ7-1426-SM-4R1JX 60-69 years, male 52.7
GTEX-14PJN-1626-SM-68727 30-39 years, male 51.8
GTEX-RN64-2326-SM-48FDW 50-59 years, male 51.6
GTEX-11PRG-0426-SM-HAV2Z 50-59 years, male 51.4
GTEX-1HSKV-1826-SM-CNPPM 60-69 years, male 49.3
GTEX-1HB9E-1926-SM-D4P34 50-59 years, male 48.9
GTEX-12WSM-1326-SM-5GCP9 60-69 years, male 47.4
GTEX-1H1ZS-2826-SM-9OSXS 70-79 years, male 46.3
GTEX-S33H-0126-SM-4AD62 30-39 years, male 45.9
GTEX-YFCO-1726-SM-4W21S 40-49 years, male 45.1
GTEX-1PPH8-1226-SM-DPRXO 20-29 years, male 45.0
GTEX-1GN73-1726-SM-9JGFR 60-69 years, male 44.1
GTEX-1LSNL-2426-SM-DHXKO 50-59 years, male 43.4
GTEX-PLZ5-1526-SM-3P5ZX 50-59 years, male 42.9
GTEX-1CAMR-1526-SM-79OLP 20-29 years, male 41.9
GTEX-1399T-1526-SM-5P9J6 60-69 years, male 41.8
GTEX-1QP6S-0826-SM-E6CPP 40-49 years, male 41.1
GTEX-1JJ6O-0526-SM-AHZ3G 60-69 years, male 39.2
GTEX-Y3I4-2026-SM-4TT6Z 50-59 years, male 38.7
GTEX-1CB4I-0926-SM-7MKFY 50-59 years, male 38.1
GTEX-1K2DA-1326-SM-CGQGP 50-59 years, male 37.6
GTEX-14A5H-0626-SM-5TDCO 60-69 years, male 35.3
GTEX-1I1GP-2426-SM-B2LXK 50-59 years, male 35.1
GTEX-1E2YA-2826-SM-7EPIN 50-59 years, male 34.9
GTEX-1NHNU-1526-SM-E6CP2 50-59 years, male 34.3
GTEX-13OW6-0126-SM-5IJGM 50-59 years, male 32.7
GTEX-18A67-1826-SM-7KFT7 50-59 years, male 31.0
GTEX-XK95-2726-SM-4V6G6 40-49 years, male 30.1
GTEX-PLZ6-1226-SM-3P5ZS 30-39 years, male 29.7
GTEX-14A6H-2326-SM-5Q5B5 30-39 years, male 26.6
GTEX-1LSNM-1726-SM-GQ1EB 50-59 years, male 26.4
GTEX-15SKB-0326-SM-6M477 60-69 years, male 26.3
GTEX-1GL5R-0826-SM-9KNTS 50-59 years, male 25.8
GTEX-1JKYR-1626-SM-AHZ3L 20-29 years, male 24.9
GTEX-1LVAO-1926-SM-GRR1I 60-69 years, male 24.9
GTEX-1J8Q3-0726-SM-AHZ3W 60-69 years, male 24.6
GTEX-13O3P-2526-SM-HLJQZ 50-59 years, male 22.3
GTEX-145MF-1726-SM-5LU9H 50-59 years, male 21.5
GTEX-1AX9K-1826-SM-731CY 50-59 years, male 21.3
GTEX-1H1DG-2726-SM-9JGI1 70-79 years, male 19.7
GTEX-1AYCT-1026-SM-79ONR 50-59 years, male 17.7
GTEX-ZDTT-2026-SM-5K7TY 60-69 years, male 17.6
GTEX-1KXAM-1826-SM-D3LAF 60-69 years, male 14.8
GTEX-1QP29-0426-SM-EVR3Y 50-59 years, male 14.0
GTEX-ZLFU-2026-SM-4WWG2 40-49 years, male 13.9
GTEX-1JKYN-1026-SM-CGQG4 30-39 years, male 13.8
GTEX-1C6VS-1126-SM-7EWEW 60-69 years, male 13.1
GTEX-1B8KZ-1826-SM-73KVJ 50-59 years, male 12.1
GTEX-1JMQK-2726-SM-CNNPI 60-69 years, male 10.8
GTEX-13OW8-0526-SM-5KM24 60-69 years, male 10.4
GTEX-13QJ3-0226-SM-5S2PU 50-59 years, male 10.3
GTEX-11DXY-0226-SM-5H123 60-69 years, male 10.2
GTEX-1KD5A-1826-SM-DHXJI 50-59 years, male 9.5
GTEX-15EO6-2526-SM-H6Q7B 50-59 years, male 9.4
GTEX-117YX-2026-SM-5GIEF 50-59 years, male 9.3
GTEX-X4XX-0726-SM-4QARS 60-69 years, male 8.9
GTEX-1AX8Z-2826-SM-73KTZ 60-69 years, male 8.7
GTEX-12BJ1-1326-SM-5BC5P 60-69 years, male 8.0
GTEX-S4Z8-2126-SM-4AD5H 60-69 years, male 7.1
GTEX-1GMR2-0726-SM-7MXVK 50-59 years, male 6.9
GTEX-1GZ2Q-1826-SM-9JGHQ 40-49 years, male 6.2
GTEX-QDVN-1926-SM-48TZ8 50-59 years, male 6.2
GTEX-ZY6K-1726-SM-5GZX8 50-59 years, male 6.0
GTEX-YECK-2526-SM-EXUR2 60-69 years, male 5.9
GTEX-15G1A-1526-SM-7KUMM 30-39 years, male 5.8
GTEX-1IKK5-2426-SM-CE6SV 60-69 years, male 5.3
GTEX-11UD2-2826-SM-5GU6X 50-59 years, male 5.1
GTEX-P4PQ-2126-SM-3NMCV 60-69 years, male 5.0
GTEX-QEL4-0126-SM-F21IC 50-59 years, male 4.7
GTEX-1A8G6-2526-SM-72D59 60-69 years, male 4.1
GTEX-WY7C-2226-SM-4ONCS 50-59 years, male 3.7
Show allShow less

TESTIS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

169.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Testis
Scaled Tags Per Million: 169.6
FF:10026-101D8 34,53,86 years, male 173.4
FF:10096-102C6 14-64 years, male 165.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo