We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Ganglion cells :
Not detected
Inner nuclear layer:
Not detected
Inner plexiform layer:
Not detected
Limiting membrane:
Not detected
Nerve fiber layer:
Not detected
Outer plexiform layer:
Not detected
Photoreceptor cells:
High
Pigment epithelial cells:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA013440
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody CAB022486
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody CAB034887
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody CAB034888
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
3767.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 3767.6
Samples: 105
Max nTPM: 7469.9
Min nTPM: 1230.5
Std nTPM: 1265.7
Median nTPM:
352_1
62 years, male
7469.9
172_1
72 years, female
6920.7
319_1
81 years, male
6392.1
6_1
73 years, female
6327.7
354_1
81 years, female
6171.4
386_1
76 years, male
6101.7
425_1
59 years, female
5479.7
355_1
70 years, female
5432.1
356_1
87 years, female
5354.8
243_1
75 years, male
5298.8
321_1
62 years, female
5202.6
335_1
73 years, female
5202.3
350_1
84 years, female
5173.6
163_1
78 years, male
5054.3
286_1
68 years, female
4962.0
375_1
74 years, female
4944.5
349_1
83 years, male
4932.7
376_1
75 years, female
4916.3
189_1
76 years, male
4869.6
237_1
82 years, male
4831.2
229_1
69 years, female
4794.0
447_1
81 years, male
4792.9
353_1
82 years, female
4771.5
389_1
86 years, female
4770.0
316_1
62 years, male
4764.8
177_1
74 years, male
4691.5
292_1
71 years, male
4678.0
347_1
72 years, male
4629.4
379_1
60 years, male
4621.4
246_1
77 years, male
4557.3
126_1
63 years, male
4470.3
318_1
68 years, male
4464.4
324_1
76 years, male
4460.2
377_1
82 years, female
4439.7
9_1
66 years, female
4399.0
218_1
71 years, female
4388.3
115_1
83 years, male
4363.9
404_1
82 years, female
4356.3
394_1
75 years, female
4257.4
35_1
74 years, female
4244.1
480_1
63 years, male
4227.1
153_1
70 years, female
4217.9
320_1
89 years, female
4216.3
526_1
61 years, male
4185.3
251_1
78 years, male
4178.1
406_1
79 years, male
4075.4
503_1
68 years, male
4026.5
396_1
62 years, male
3937.4
468_1
89 years, male
3888.0
405_1
91 years, male
3804.5
517_1
88 years, male
3739.3
137_1
83 years, male
3738.7
291_1
76 years, male
3669.9
99_1
64 years, male
3662.0
142_1
61 years, female
3595.2
266_1
85 years, male
3593.3
265_1
87 years, male
3590.6
264_1
73 years, female
3460.6
348_1
84 years, male
3442.7
117_1
61 years, male
3434.3
415_1
77 years, female
3408.6
518_1
75 years, female
3358.3
322_1
76 years, male
3353.4
254_1
77 years, female
3338.7
81_1
67 years, male
3314.7
145_1
84 years, male
3284.0
293_1
68 years, female
3260.9
351_1
91 years, male
3237.3
499_1
55 years, female
3221.6
217_1
76 years, male
3211.0
384_1
83 years, male
3195.4
32_1
67 years, male
3137.4
317_1
60 years, male
3116.4
414_1
84 years, female
3070.8
43_1
64 years, female
3014.2
18_1
88 years, male
3005.5
2_1
77 years, female
2996.5
162_1
79 years, female
2928.0
315_1
62 years, female
2855.4
173_1
67 years, male
2848.9
17_1
71 years, male
2831.6
120_1
70 years, female
2823.7
506_1
65 years, male
2805.5
313_1
79 years, female
2776.4
466_1
57 years, female
2697.0
4_1
88 years, female
2607.3
42_1
85 years, male
2599.8
311_1
78 years, male
2564.8
109_1
81 years, female
2383.1
288_1
66 years, female
2338.0
452_1
88 years, female
2302.0
139_1
64 years, female
2300.9
295_1
61 years, female
2241.0
490_1
67 years, female
2206.9
149_1
88 years, male
2074.1
307_1
66 years, female
2008.4
119_1
70 years, female
2001.8
413_1
59 years, female
1819.0
314_1
67 years, male
1689.3
89_1
63 years, male
1661.1
495_1
57 years, female
1632.9
491_1
89 years, female
1529.1
501_1
88 years, male
1363.1
41_1
94 years, female
1322.1
308_1
70 years, female
1230.5
Show allShow less
RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.