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  • TISSUE

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  • DRAP1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:148.0 nTPM
FANTOM5:115.4 Scaled Tags Per Million
Pig:223.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA006790
Glial cells Medium
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 148.0
Samples: 300

Max nTPM: 303.3
Min nTPM: 64.6
Std nTPM: 34.6
Median nTPM: 144.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 303.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 292.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 275.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 245.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 245.2
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 244.5
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 235.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 233.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 231.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 230.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 225.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 212.7
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 205.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 203.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 201.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 199.3
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 196.7
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 195.9
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 195.1
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 194.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 194.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 193.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 192.5
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 191.4
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 190.1
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 190.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 189.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 189.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 187.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 187.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 187.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 186.6
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 185.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 184.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 184.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 184.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 183.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 183.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 183.3
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 183.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 182.7
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 181.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 181.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 181.1
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 181.1
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 178.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 178.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 177.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 177.5
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 176.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 176.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 176.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 176.1
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 175.9
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 175.3
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 174.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 173.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 173.0
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 172.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 171.2
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 171.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 171.0
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 170.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 170.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 170.3
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 169.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 169.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 168.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 168.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 168.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 168.2
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 168.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 167.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 167.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 167.1
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 166.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 165.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 165.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 165.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 165.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 165.1
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 164.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 164.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 164.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 163.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 162.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 162.1
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 161.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 161.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 160.8
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 160.8
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 160.7
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 160.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 160.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 159.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 159.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 159.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 159.4
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 159.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 158.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 158.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 158.1
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 157.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 156.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 156.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 156.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 156.4
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 156.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 156.1
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 156.1
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 156.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 155.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 155.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 155.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 155.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 155.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 154.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 153.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 153.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 153.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 153.2
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 153.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 153.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 152.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 152.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 151.9
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 151.6
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 151.1
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 151.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 150.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 150.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 150.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 150.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 150.1
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 149.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 149.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 148.8
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 148.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 148.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 148.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 147.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 147.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 147.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 147.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 146.0
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 145.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 145.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 145.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 145.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 144.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 144.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 144.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 143.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 143.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 143.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 143.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 143.2
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 142.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 142.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 141.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 141.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 141.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 141.4
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 141.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 141.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 140.7
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 140.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 140.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 140.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 140.0
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 139.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 139.9
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 139.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 139.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 139.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 139.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 139.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 139.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 138.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 138.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 138.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 138.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 137.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 137.9
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 137.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 137.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 137.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 137.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 137.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 136.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 136.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 136.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 136.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 135.9
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 135.8
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 135.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 135.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 135.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 134.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 134.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 134.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 134.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 134.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 134.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 134.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 132.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 132.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 132.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 132.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 132.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 132.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 132.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 131.6
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 131.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 130.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 130.5
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 130.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 130.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 129.4
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 129.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 129.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 128.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 128.6
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 127.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 127.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 127.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 127.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 127.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 126.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 125.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 125.1
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 125.0
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 124.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 124.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 124.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 123.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 123.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 122.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 122.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 121.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 121.5
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 121.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 120.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 120.4
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 120.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 119.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 119.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 119.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 118.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 118.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 117.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 116.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 116.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 116.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 115.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 115.0
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 114.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 114.0
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 113.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 112.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 112.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 111.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 111.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 110.8
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 110.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 109.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 109.5
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 109.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 108.7
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 108.4
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 107.8
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 107.1
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 106.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 103.5
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 103.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 103.2
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 102.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 102.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 101.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 99.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 99.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 99.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 98.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 97.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 96.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 95.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 95.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 94.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 87.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 83.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 82.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 82.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 81.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 81.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 79.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 79.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 76.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 74.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 64.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

115.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 115.4
FF:10164-103B2 76 years, female 115.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

223.0
Pig sample Sample description nTPM
Caudate
nTPM: 223.1
Samples: 4

Max nTPM: 255.3
Min nTPM: 185.2
Sample A Female 185.2
Sample B Female 252.9
Sample C Male 255.3
Sample D Male 198.8

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