COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
RNA expressioni
Consensus:27.7 nTPM
HPA:4.2 nTPM
GTEx:27.7 nTPM
FANTOM5:21.3 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA042008
Endothelial cells Low
Glandular cells High


COLON - HPA RNA-seqi
Average nTPMi 4.2
overview
Male, age 54
Colon sample 67
nTPM: 2.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 3.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 1.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 5.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 6.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 7.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 2.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 7.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 1.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 2.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 3.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 8.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 27.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 27.7
Samples: 419

Max nTPM: 65.7
Min nTPM: 1.5
Std nTPM: 12.1
Median nTPM: 26.8
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 65.7
GTEX-1GN73-2726-SM-9WYUB 60-69 years, male 65.1
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 63.3
GTEX-1C64N-2226-SM-7SB7C 50-59 years, male 62.8
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 57.8
GTEX-1KD4Q-2626-SM-HLJQP 40-49 years, male 57.7
GTEX-113JC-1726-SM-GIN9H 50-59 years, female 56.7
GTEX-1B8L1-1926-SM-7IGND 60-69 years, male 56.6
GTEX-1S5VW-2726-SM-G8LKM 60-69 years, male 55.8
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 55.6
GTEX-1EU9M-2726-SM-7P8QD 60-69 years, male 54.8
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Colon - Transverse
Average nTPM: 12.5
Samples: 479

Max nTPM: 61.7
Min nTPM: 0.6
Std nTPM: 10.9
Median nTPM: 9.6
GTEX-11GSP-1626-SM-5986N 60-69 years, female 61.7
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 52.1
GTEX-14DAQ-2726-SM-5S2QY 60-69 years, female 51.4
GTEX-1IGQW-2326-SM-CE6RV 60-69 years, male 45.7
GTEX-XQ3S-2626-SM-F21J3 20-29 years, male 45.7
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 41.8
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 41.3
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 41.3
GTEX-1AYD5-1726-SM-7RHFW 50-59 years, male 40.6
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 39.5
GTEX-11NUK-2226-SM-GI4XE 50-59 years, male 39.1
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 21.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 21.3
FF:10014-101C5 62,83,84 years, mixed 21.3

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