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  • SUMMARY

  • TISSUE

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  • EIF3C
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:87.2 nTPM
FANTOM5:13.6 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA047097Antibody HPA049495Antibody HPA050112Antibody CAB034045
Glial cells LowMediumLowLow
Neuronal cells MediumMediumMediumMedium






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 87.2
Samples: 300

Max nTPM: 289.9
Min nTPM: 29.1
Std nTPM: 30.4
Median nTPM: 83.6
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 289.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 194.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 177.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 176.2
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 165.9
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 160.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 160.3
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 153.6
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 150.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 145.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 143.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 141.2
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 140.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 138.8
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 138.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 138.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 137.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 137.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 137.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 137.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 134.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 134.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 133.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 130.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 130.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 128.8
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 127.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 127.8
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 126.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 125.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 125.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 124.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 124.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 123.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 121.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 120.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 120.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 118.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 117.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 117.5
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 117.3
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 117.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 116.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 115.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 115.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 114.6
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 114.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 114.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 114.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 113.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 113.3
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 112.7
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 112.0
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 111.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 110.3
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 110.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 109.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 109.3
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 109.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 108.9
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 108.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 108.6
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 108.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 108.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 107.5
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 107.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 106.9
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 106.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 105.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 103.9
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 103.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 103.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 102.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 101.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 101.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 101.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 101.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 101.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 101.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 101.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 100.3
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 99.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 99.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 99.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 98.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 98.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 98.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 98.3
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 98.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 98.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 97.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 97.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 96.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 96.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 96.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 96.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 95.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 95.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 95.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 95.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 95.2
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 95.1
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 94.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 94.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 94.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 94.4
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 94.2
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 94.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 93.3
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 93.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 93.1
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 93.0
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 92.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 92.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 92.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 92.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 92.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 92.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 90.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 90.5
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 90.4
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 90.2
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 89.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 89.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 89.3
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 89.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 89.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 88.4
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 88.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 88.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 88.0
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 87.6
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 87.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 87.1
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 86.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 86.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 86.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 86.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 85.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 85.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 85.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 84.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 84.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 84.2
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 84.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 84.0
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 84.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 83.8
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 83.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 83.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 83.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 83.2
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 82.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 82.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 82.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 82.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 82.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 81.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 81.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 81.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 81.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 81.3
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 81.0
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 80.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 80.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 80.8
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 80.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 80.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 80.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 80.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 80.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 79.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 79.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 79.8
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 79.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 78.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 78.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 78.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 78.4
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 78.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 78.3
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 78.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 77.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 77.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 77.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 77.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 77.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 76.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 76.0
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 75.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 75.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 74.9
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 74.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 74.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 73.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 72.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 72.9
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 72.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 72.4
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 72.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 72.0
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 71.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 71.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 71.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 71.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 70.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 70.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 70.3
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 70.2
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 70.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 69.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 69.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 69.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 69.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 68.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 68.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 67.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 67.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 67.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 67.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 67.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 66.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 65.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 65.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 65.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 65.1
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 65.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 65.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 64.6
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 63.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 63.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 63.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 63.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 62.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 62.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 62.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 61.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 61.6
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 61.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 61.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 61.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 60.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 60.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 60.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 60.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 60.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 60.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 60.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 60.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 59.7
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 59.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 59.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 59.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 58.8
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 58.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 58.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 58.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 57.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 57.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 56.4
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 55.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 55.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 55.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 55.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 55.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 53.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 53.7
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 52.9
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 52.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 52.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 51.9
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 51.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 51.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 50.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 49.7
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 49.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 49.1
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 48.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 47.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 47.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 47.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 46.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 46.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 45.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 44.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 44.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 44.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 43.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 43.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 43.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 42.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 42.5
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 42.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 38.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 37.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 36.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 36.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 32.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 29.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

13.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 13.6
FF:10164-103B2 76 years, female 13.6

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