HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:72.7 nTPM
HPA Brain:34.5 nTPM
GTEx:72.7 nTPM
FANTOM5:148.9 Scaled Tags Per Million
Pig:11.9 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 34.5
Sample id Sample description nTPM
Hippocampus
nTPM: 34.0
1898 Male, age 80, left hemisphere 42.6
1855 Male, age 76, left hemisphere 39.5
1911 Female, age 85, right hemisphere 34.8
2529 Female, age 94, left hemisphere 30.2
2621 Female, age 67, right hemisphere 29.9
2148 Female, age 91, left hemisphere 27.2
Dentate gyrus
nTPM: 31.9
2010 Male, age 76, both hemispheres 40.1
1927 Female, age 91, both hemispheres 32.8
2528 Male, age 74, both hemispheres 31.1
2530 Female, age 94, left hemisphere 30.8
2531 Female, age 67, both hemispheres 28.6
2246 Female, age 85, both hemispheres 28.1
Entorhinal gyrus
nTPM: 24.9
1787 Male, age 76, left hemisphere 28.9
1938 Female, age 85, left hemisphere 27.9
2117 Female, age 91, right hemisphere 27.9
2686 Male, age 75, right hemisphere 24.2
2764 Male, age 80, right hemisphere 21.1
2613 Female, age 94, left hemisphere 19.0
Hippocampus, CA1
nTPM: 34.5
1873 Female, age 85, both hemispheres 38.8
2045 Male, age 76, both hemispheres 35.3
2749 Male, age 80, left hemisphere 33.7
2527 Male, age 74, both hemispheres 33.4
2082 Female, age 91, right hemisphere 31.4
Hippocampus, CA2
nTPM: 34.3
2249 Male, age 74, both hemispheres 44.3
1940 Female, age 85, left hemisphere 36.6
1892 Male, age 76, both hemispheres 32.4
1963 Male, age 80, left hemisphere 31.4
2437 Female, age 94, left hemisphere 30.6
2113 Female, age 91, right hemisphere 30.4
Hippocampus, CA3
nTPM: 32.1
2436 Male, age 74, both hemispheres 56.1
1867 Male, age 76, both hemispheres 34.8
1891 Female, age 85, both hemispheres 32.7
2137 Male, age 80, left hemisphere 25.8
2620 Female, age 94, left hemisphere 22.5
2861 Female, age 67, both hemispheres 21.0
Parahippocampal cortex
nTPM: 28.0
2250 Female, age 67, right hemisphere 38.0
2018 Male, age 76, both hemispheres 37.2
1933 Female, age 85, both hemispheres 29.7
2245 Female, age 91, both hemispheres 29.1
1850 Male, age 80, both hemispheres 28.2
1990 Female, age 91, right hemisphere 28.0
2693 Female, age 94, both hemispheres 25.2
2532 Female, age 72, left hemisphere 22.7
2692 Male, age 74, both hemispheres 22.2
2622 Female, age 67, right hemisphere 19.9
Perirhinal gyrus
nTPM: 28.1
1847 Female, age 91, left hemisphere 31.1
1841 Female, age 85, right hemisphere 30.9
2521 Female, age 94, right hemisphere 26.5
2848 Male, age 76, right hemisphere 26.0
1794 Male, age 80, right hemisphere 25.9
Subiculum
nTPM: 30.2
2042 Male, age 76, both hemispheres 37.5
1977 Female, age 85, both hemispheres 33.2
2729 Female, age 91, right hemisphere 31.5
1901 Male, age 80, both hemispheres 29.5
2619 Male, age 74, both hemispheres 26.4
2438 Female, age 94, left hemisphere 23.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 72.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.7
Samples: 255

Max nTPM: 237.8
Min nTPM: 34.5
Std nTPM: 19.2
Median nTPM: 71.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 237.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 123.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 114.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 112.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 111.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 111.1
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 107.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 106.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 106.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 105.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 105.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 148.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 148.9
FF:10169-103B7 60 years, female 176.5
FF:10153-102I9 76 years, female 121.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.9
Pig sample Sample description nTPM
Subiculum
nTPM: 11.9
Samples: 4

Max nTPM: 12.7
Min nTPM: 10.0
Sample A Female 10.0
Sample B Female 12.7
Sample C Male 12.7
Sample D Male 12.3
Dorsal hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 12.7
Min nTPM: 11.1
Sample A Female 11.1
Sample B Female 11.4
Sample C Male 12.3
Sample D Male 12.7
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.1
Sample A Female 10.1
Sample B Female 10.7
Sample C Male 11.2
Sample D Male 12.2
Ventral hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.7
Sample A Female 12.1
Sample B Female 12.5
Sample C Male 10.7
Sample D Male 11.6

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