COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Low
RNA expressioni
Consensus:59.2 nTPM
HPA:36.9 nTPM
GTEx:59.2 nTPM
FANTOM5:49.7 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA022800Antibody HPA023567
Endothelial cells LowHigh
Glandular cells MediumMedium
Peripheral nerve/ganglion LowHigh





COLON - HPA RNA-seqi
Average nTPMi 36.9
overview
Male, age 54
Colon sample 67
nTPM: 42.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 28.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 29.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 29.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 27
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 41.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 48.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 36.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 37.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 32.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 40.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 37.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 49.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 59.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 59.2
Samples: 419

Max nTPM: 104.4
Min nTPM: 31.5
Std nTPM: 11.6
Median nTPM: 59.3
GTEX-1NV8Z-2526-SM-F648C 60-69 years, male 104.4
GTEX-1C6VQ-2626-SM-7IGMQ 50-59 years, male 100.5
GTEX-1IDJU-1926-SM-CL53W 60-69 years, female 92.7
GTEX-1N2DV-1826-SM-E6CJ5 40-49 years, male 91.2
GTEX-15SHU-2626-SM-GPI9H 40-49 years, female 90.9
GTEX-1497J-1626-SM-GQ1CZ 60-69 years, male 90.4
GTEX-1QP29-2526-SM-E6CQ3 50-59 years, male 88.1
GTEX-1M4P7-2226-SM-GPI9V 60-69 years, male 87.7
GTEX-1HSEH-1926-SM-A96SB 60-69 years, male 86.3
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 86.0
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 84.3
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Colon - Transverse
Average nTPM: 51.2
Samples: 479

Max nTPM: 86.8
Min nTPM: 26.8
Std nTPM: 10.6
Median nTPM: 50.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 86.8
GTEX-1QMI2-2626-SM-E6CR4 60-69 years, male 84.2
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 82.2
GTEX-ZVE2-2526-SM-GNINP 50-59 years, male 81.4
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 80.8
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 79.6
GTEX-QEG5-2226-SM-GQ1CD 20-29 years, male 78.6
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 76.6
GTEX-1RQEC-2726-SM-GOR1P 60-69 years, male 75.9
GTEX-1IDJF-1826-SM-CKZOE 20-29 years, male 75.5
GTEX-1C6VQ-2726-SM-73KUL 50-59 years, male 75.1
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 49.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 49.7
FF:10014-101C5 62,83,84 years, mixed 49.7

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