PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1932.2 nTPM
FANTOM5:14.9 Scaled Tags Per Million
Pig:3.4 nTPM
Mouse:2.3 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1932.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1707.0
2301 Female, age 85, both hemispheres 2087.4
2188 Female, age 91, both hemispheres 1857.5
1984 Male, age 76, both hemispheres 1695.0
2090 Male, age 80, both hemispheres 1187.9
Area postrema
nTPM: 1400.3
2306 Male, age 80, both hemispheres 2050.2
2799 Male, age 61, both hemispheres 1175.9
2054 Male, age 76, both hemispheres 974.6
Dorsal cochlear nucleus
nTPM: 1213.4
2187 Female, age 91, both hemispheres 1569.0
2370 Male, age 61, both hemispheres 1386.0
2378 Male, age 80, both hemispheres 1333.6
2058 Male, age 76, both hemispheres 964.0
2802 Male, age 74, right hemisphere 814.5
Dorsal medullary reticular nucleus
nTPM: 1156.0
2373 Male, age 61, both hemispheres 1486.5
2040 Female, age 85, both hemispheres 1109.4
2088 Male, age 76, both hemispheres 872.0
Dorsal motor vagal complex
nTPM: 1369.2
2185 Male, age 76, both hemispheres 1874.5
2813 Female, age 72, unknown 1778.2
2000 Male, age 74, unknown 1608.1
2807 Female, age 85, both hemispheres 1286.5
2844 Male, age 55, unknown 1206.4
2797 Male, age 61, both hemispheres 1175.0
2643 Male, age 74, both hemispheres 1110.6
2133 Female, age 91, both hemispheres 914.5
Dorsal tegmental nucleus
nTPM: 1326.7
2358 Male, age 61, both hemispheres 1717.0
2083 Male, age 80, both hemispheres 1328.8
1936 Male, age 76, left hemisphere 1165.9
2326 Male, age 74, both hemispheres 1095.1
Dorsolateral tegmental area
nTPM: 1338.5
2360 Male, age 74, both hemispheres 1484.5
2654 Male, age 80, both hemispheres 1458.2
2337 Male, age 61, both hemispheres 1358.0
2751 Female, age 85, both hemispheres 1346.3
2141 Male, age 76, both hemispheres 1045.2
Gigantocellular reticular nuclei, medullary
nTPM: 1502.2
2310 Male, age 80, both hemispheres 1750.1
2314 Male, age 61, both hemispheres 1708.6
2022 Male, age 76, right hemisphere 1499.9
2387 Female, age 91, both hemispheres 1441.6
1876 Female, age 85, both hemispheres 1334.4
2462 Male, age 74, both hemispheres 1278.7
Gigantocellular reticular nuclei, pars
nTPM: 1492.9
2168 Male, age 76, both hemispheres 1819.7
2336 Male, age 61, both hemispheres 1668.9
2706 Male, age 80, both hemispheres 1458.3
2330 Male, age 80, both hemispheres 1423.9
2084 Female, age 85, both hemispheres 1093.5
Inferior olive
nTPM: 1932.2
2628 Female, age 91, both hemispheres 2285.2
2563 Male, age 74, both hemispheres 2124.0
2178 Male, age 61, both hemispheres 1846.4
2085 Female, age 85, both hemispheres 1736.1
2379 Male, age 80, both hemispheres 1669.5
Kolliker-Fuse nucleus
nTPM: 1719.6
2793 Female, age 91, left hemisphere 2135.1
2315 Male, age 76, right hemisphere 1518.1
2163 Male, age 80, both hemispheres 1505.7
Lateral lemniscal nuclei
nTPM: 1653.7
2169 Male, age 76, both hemispheres 2167.0
2320 Female, age 91, left hemisphere 1742.7
2453 Male, age 74, right hemisphere 1721.0
2746 Female, age 85, left hemisphere 1360.4
2036 Male, age 80, both hemispheres 1277.6
Lateral medullary reticular nucleus
nTPM: 1639.1
2190 Female, age 85, both hemispheres 2252.7
2374 Male, age 61, both hemispheres 1970.5
2852 Male, age 80, both hemispheres 1456.7
2804 Female, age 91, both hemispheres 1417.6
2305 Male, age 74, both hemispheres 1395.9
2044 Male, age 76, both hemispheres 1341.2
Lateral parabrachial nucleus
nTPM: 1329.2
2792 Male, age 76, both hemispheres 1619.0
2139 Female, age 85, right hemisphere 1503.4
2013 Male, age 80, both hemispheres 1233.4
2790 Male, age 61, both hemispheres 961.1
Lateral vestibular nucleus
nTPM: 1637.3
2311 Male, age 80, both hemispheres 1689.7
2184 Male, age 76, both hemispheres 1584.9
Locus coeruleus
nTPM: 1178.3
2162 Male, age 80, both hemispheres 1635.6
2720 Male, age 74, both hemispheres 1176.9
2317 Female, age 72, unknown 1154.2
1980 Male, age 76, both hemispheres 1131.2
2788 Male, age 74, unknown 1130.6
2014 Male, age 55, unknown 1058.9
2123 Female, age 91, both hemispheres 961.1
Medial olivary nucleus
nTPM: 1359.3
2851 Male, age 80, both hemispheres 1904.1
1962 Male, age 76, both hemispheres 1618.2
2138 Female, age 91, both hemispheres 1144.2
1943 Male, age 61, both hemispheres 770.7
Medial parabrachial nucleus
nTPM: 1396.3
2170 Female, age 91, both hemispheres 1767.6
2854 Male, age 80, both hemispheres 1619.3
2156 Male, age 61, both hemispheres 1544.9
2786 Male, age 76, both hemispheres 1167.4
2463 Female, age 85, right hemisphere 882.1
Medial periolivary nuclei
nTPM: 1455.3
2171 Female, age 85, both hemispheres 2171.2
2458 Female, age 91, both hemispheres 1878.5
2063 Male, age 76, both hemispheres 1383.2
2081 Male, age 80, both hemispheres 952.9
2791 Male, age 74, right hemisphere 890.5
Medial vestibular nucleus
nTPM: 1317.2
2624 Male, age 61, both hemispheres 1750.6
2743 Female, age 85, both hemispheres 1483.4
2801 Male, age 74, both hemispheres 1470.8
2803 Female, age 91, both hemispheres 1314.3
2093 Male, age 80, both hemispheres 1034.2
2134 Male, age 76, both hemispheres 849.7
Motor facial nucleus
nTPM: 1420.3
2697 Female, age 85, both hemispheres 2082.0
2365 Male, age 74, right hemisphere 1619.0
2795 Female, age 91, both hemispheres 1382.4
2327 Male, age 80, both hemispheres 1366.6
2062 Male, age 76, both hemispheres 1316.5
2126 Male, age 61, both hemispheres 755.1
Motor hypoglossal nucleus
nTPM: 1373.2
2461 Male, age 61, both hemispheres 2099.9
2182 Male, age 80, both hemispheres 1787.7
2132 Female, age 85, both hemispheres 1062.6
2125 Female, age 91, both hemispheres 990.2
2277 Male, age 76, both hemispheres 925.5
Motor trigeminal nucleus
nTPM: 1330.1
2560 Male, age 74, both hemispheres 1622.2
2321 Female, age 91, both hemispheres 1404.7
2309 Male, age 76, both hemispheres 1369.6
2335 Male, age 61, both hemispheres 1216.2
2079 Male, age 80, both hemispheres 1038.0
Nuclei of the trapezoid body
nTPM: 1604.1
1983 Male, age 76, both hemispheres 2071.6
2368 Female, age 91, both hemispheres 1625.4
2166 Male, age 80, both hemispheres 1598.0
2735 Female, age 85, both hemispheres 1374.0
2159 Male, age 61, both hemispheres 1351.5
Nucleus ambiguus
nTPM: 774.2
2071 Male, age 76, both hemispheres 834.9
2096 Female, age 85, both hemispheres 713.5
Nucleus cuneatus
nTPM: 1382.9
2562 Male, age 61, both hemispheres 1754.2
2381 Male, age 80, both hemispheres 1706.6
2564 Male, age 74, both hemispheres 1544.7
2808 Female, age 85, both hemispheres 1530.9
2380 Male, age 80, both hemispheres 1466.3
2376 Male, age 61, both hemispheres 1400.5
2805 Female, age 91, both hemispheres 1177.4
2100 Male, age 76, both hemispheres 955.4
2131 Male, age 76, both hemispheres 910.4
Nucleus gracilis
nTPM: 1683.0
2382 Male, age 80, both hemispheres 1936.2
2299 Female, age 85, both hemispheres 1562.5
2627 Male, age 74, both hemispheres 1550.3
Nucleus raphe magnus
nTPM: 1763.9
2455 Male, age 74, both hemispheres 1959.6
2172 Female, age 85, both hemispheres 1946.4
2459 Female, age 91, both hemispheres 1818.2
2328 Male, age 80, both hemispheres 1805.7
2051 Male, age 76, both hemispheres 1616.3
2160 Male, age 61, both hemispheres 1437.2
Nucleus raphe obscurus
nTPM: 1007.9
2845 Female, age 85, midline 1130.2
2800 Male, age 61, midline 1123.6
2142 Male, age 76, midline 769.9
Nucleus raphe pallidus
nTPM: 942.4
2183 Male, age 80, midline 1585.2
1924 Male, age 61, midline 877.2
2145 Male, age 76, midline 365.0
Nucleus tractus solitarii
nTPM: 1444.5
2191 Female, age 85, both hemispheres 2055.4
2307 Male, age 80, both hemispheres 1662.0
2656 Male, age 76, both hemispheres 1391.4
2144 Female, age 91, right hemisphere 669.3
Paramedian reticular nucleus
nTPM: 1193.2
2050 Female, age 85, both hemispheres 1462.4
2052 Male, age 76, both hemispheres 1242.6
2313 Male, age 61, both hemispheres 1173.1
2057 Male, age 80, both hemispheres 894.5
Parvicellular reticular nuclei
nTPM: 1227.8
2558 Male, age 74, both hemispheres 1695.0
2095 Male, age 76, both hemispheres 1209.4
2119 Male, age 80, both hemispheres 779.0
Parvicellular reticular nuclei, medullary
nTPM: 1436.2
2181 Male, age 80, left hemisphere 1784.3
2189 Female, age 91, both hemispheres 1479.0
2091 Female, age 85, both hemispheres 1045.3
Pedunculopontine tegmental nucleus
nTPM: 1367.8
2338 Male, age 61, both hemispheres 1547.9
2334 Male, age 80, both hemispheres 1455.0
1921 Female, age 85, both hemispheres 1100.5
Peritrigeminal nucleus
nTPM: 1280.0
2179 Male, age 61, both hemispheres 1429.9
2067 Female, age 85, both hemispheres 1300.1
2136 Male, age 76, both hemispheres 1110.0
Pontine nuclei
nTPM: 1296.9
2454 Male, age 74, left hemisphere 2005.6
2787 Female, age 85, both hemispheres 1535.1
1968 Male, age 76, left hemisphere 1484.7
2319 Female, age 91, both hemispheres 1450.8
1863 Male, age 55, unknown 1131.8
2115 Male, age 80, left hemisphere 1052.0
2109 Female, age 72, unknown 868.9
2727 Male, age 61, right hemisphere 846.5
Pontine raphe nucleus
nTPM: 1232.8
2122 Female, age 85, midline 1339.2
2853 Male, age 76, midline 1126.4
Posteroventral cochlear nucleus
nTPM: 1145.0
2752 Female, age 85, both hemispheres 1396.7
2371 Male, age 61, both hemispheres 1383.9
2341 Male, age 80, both hemispheres 1227.3
2070 Male, age 76, both hemispheres 939.4
2135 Female, age 91, both hemispheres 777.5
Prepositus hypoglossal nucleus
nTPM: 1197.7
2855 Female, age 85, right hemisphere 1200.6
2086 Male, age 80, both hemispheres 1194.7
Principal sensory trigeminal nucleus
nTPM: 1416.8
2367 Female, age 91, left hemisphere 1818.2
2324 Male, age 76, both hemispheres 1451.6
2158 Male, age 61, both hemispheres 1300.3
2008 Male, age 80, left hemisphere 1097.2
Reticular pontine nucleus, caudal
nTPM: 1582.4
2457 Female, age 91, both hemispheres 1770.8
2559 Male, age 74, both hemispheres 1590.9
2332 Male, age 80, right hemisphere 1519.4
2092 Male, age 76, both hemispheres 1448.3
Reticular pontine nucleus, oral
nTPM: 1559.5
2366 Female, age 91, both hemispheres 2205.5
2167 Male, age 76, both hemispheres 1760.3
2361 Male, age 74, both hemispheres 1546.5
2012 Female, age 85, both hemispheres 1287.4
1939 Male, age 80, both hemispheres 997.9
Reticulotegmental nucleus
nTPM: 1472.5
2452 Male, age 74, both hemispheres 1744.4
2333 Male, age 80, both hemispheres 1437.9
2322 Female, age 91, both hemispheres 1390.5
2325 Male, age 76, both hemispheres 1317.1
Spinal trigeminal nucleus, caudal
nTPM: 1416.2
2308 Male, age 80, both hemispheres 1821.8
2312 Male, age 61, both hemispheres 1648.1
2390 Female, age 91, both hemispheres 1363.7
2447 Male, age 76, both hemispheres 1158.7
2642 Male, age 74, both hemispheres 1088.7
Spinal trigeminal nucleus, interpolar
nTPM: 1242.9
2389 Female, age 91, both hemispheres 1687.1
2625 Male, age 61, both hemispheres 1205.8
2386 Female, age 85, both hemispheres 1190.6
2066 Male, age 76, right hemisphere 1175.1
2033 Male, age 80, both hemispheres 956.0
Spinal trigeminal nucleus, oral
nTPM: 1553.5
1978 Male, age 76, both hemispheres 1616.4
2164 Male, age 80, both hemispheres 1615.1
2737 Female, age 85, both hemispheres 1429.0
Spinal vestibular nucleus
nTPM: 1547.5
2748 Male, age 76, both hemispheres 1838.5
2186 Female, age 91, both hemispheres 1728.5
2806 Female, age 85, both hemispheres 1637.5
2796 Male, age 61, both hemispheres 1558.7
2780 Male, age 80, both hemispheres 1367.3
2384 Male, age 74, both hemispheres 1154.8
Subcoeruleus area
nTPM: 1196.5
2451 Male, age 74, both hemispheres 1503.1
2323 Female, age 91, left hemisphere 1303.2
2369 Female, age 85, left hemisphere 1125.2
2089 Male, age 76, left hemisphere 1070.0
1958 Male, age 80, both hemispheres 981.2
Superior olive
nTPM: 1626.7
2561 Female, age 91, both hemispheres 1915.6
2020 Male, age 76, both hemispheres 1781.8
2329 Male, age 80, right hemisphere 1590.2
2364 Male, age 74, right hemisphere 1507.2
1875 Female, age 85, both hemispheres 1338.7
Superior vestibular nucleus
nTPM: 1419.2
2383 Male, age 74, both hemispheres 1693.2
2015 Male, age 80, both hemispheres 1429.7
2061 Male, age 76, both hemispheres 1134.6
Ventral medullary reticular nucleus
nTPM: 1312.2
2372 Male, age 61, both hemispheres 1553.8
2060 Male, age 76, both hemispheres 1070.5
Ventral periolivary nuclei
nTPM: 1377.8
2165 Male, age 80, both hemispheres 1795.5
2130 Female, age 85, both hemispheres 1326.4
2794 Female, age 91, left hemisphere 1284.2
2023 Male, age 76, both hemispheres 1105.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1367.7
2302 Female, age 91, both hemispheres 1719.3
2180 Male, age 61, both hemispheres 1539.3
1986 Male, age 76, both hemispheres 1396.1
2741 Female, age 85, both hemispheres 1322.1
2118 Male, age 80, both hemispheres 861.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1628.0
2161 Male, age 80, both hemispheres 1988.4
2840 Female, age 85, both hemispheres 1853.7
2449 Male, age 74, both hemispheres 1768.5
2456 Female, age 91, both hemispheres 1654.4
1959 Male, age 76, both hemispheres 1315.0
2359 Male, age 61, both hemispheres 1188.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 14.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 11.0
FF:10165-103B3 76 years, female 14.9
FF:10182-103D2 60 years, female 7.1
Medulla oblongata
Scaled Tags Per Million: 14.9
FF:10155-103A2 76 years, female 17.7
FF:10038-101F2 18-64 years, mixed 16.2
FF:10174-103C3 60 years, female 10.7
Pons
Scaled Tags Per Million: 9.6
FF:10033-101E6 18-54 years, mixed 9.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 3.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2.8
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 2.5
Sample C Male 3.7
Sample D Male 2.7
Pons
nTPM: 3.4
Samples: 4

Max nTPM: 4.1
Min nTPM: 2.5
Sample A Female 3.1
Sample B Female 4.1
Sample C Male 3.7
Sample D Male 2.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 2.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 2.3
Samples: 4

Max nTPM: 2.4
Min nTPM: 2.1
Sample A Male 2.3
Sample B Male 2.4
Sample C Female 2.1
Sample D Female 2.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
68160832 Antisense, RP_041122_01_A02, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 0.1
68160832 Antisense, RP_041122_01_A02, Mouse strain C57BL/6J (56 days, male) 0.1

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