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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1679.0 nTPM
HPA:1679.0 nTPM
GTEx:1433.0 nTPM
FANTOM5:52.7 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA003403
Glandular cells High



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1679.0
overview
Female, age 68
Salivary gland sample 216
nTPM: 2093.6
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1263.4
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1679.9
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1433.0
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1433.0
Samples: 181

Max nTPM: 3003.1
Min nTPM: 712.8
Std nTPM: 340.1
Median nTPM: 1371.9
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 3003.1
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 2834.4
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 2441.5
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 2408.4
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 2280.4
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 2273.8
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 2246.2
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 2231.0
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 2115.9
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 2060.8
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 2032.3
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 1995.6
GTEX-146FR-1226-SM-5MR78 60-69 years, female 1975.7
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 1974.7
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 1960.1
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 1951.5
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 1914.8
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 1859.5
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1837.6
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 1796.6
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 1792.5
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 1746.9
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 1745.2
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1721.8
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 1720.5
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 1700.8
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1688.4
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 1680.1
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 1679.7
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 1675.6
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 1660.3
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 1657.6
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 1657.1
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 1645.2
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1644.5
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1642.7
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 1632.7
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 1611.5
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 1606.3
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1605.7
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 1602.4
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1596.4
GTEX-15SHV-2226-SM-6M464 60-69 years, male 1589.5
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 1589.1
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 1588.3
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 1585.6
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 1584.5
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 1573.8
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 1571.3
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 1570.3
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 1570.3
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 1555.4
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1547.5
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 1546.2
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 1533.2
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 1532.6
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 1514.0
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 1512.3
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 1511.9
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 1492.8
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 1490.5
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 1489.4
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1488.5
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 1483.8
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 1478.0
GTEX-1445S-2926-SM-5O993 60-69 years, male 1477.8
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 1471.0
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 1467.0
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 1458.5
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 1457.7
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 1444.3
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 1439.7
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1439.6
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 1439.5
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 1438.5
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 1435.2
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 1434.2
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 1427.2
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 1423.4
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 1420.4
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1414.4
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1411.5
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1396.6
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 1396.2
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1388.6
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1383.4
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1382.7
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 1381.1
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 1373.9
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1372.9
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1371.9
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 1371.4
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 1359.4
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 1356.0
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 1353.9
GTEX-13113-1526-SM-5EGHV 60-69 years, female 1353.7
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1353.3
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1346.6
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 1343.7
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 1343.2
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 1342.5
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 1341.8
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1337.8
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1333.9
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 1329.0
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 1321.6
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 1317.8
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1315.9
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 1311.1
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 1304.3
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1292.5
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 1288.9
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1276.4
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1273.6
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 1269.4
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 1265.4
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1262.1
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1262.1
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 1261.0
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 1260.4
GTEX-11P82-0926-SM-5986X 20-29 years, male 1257.8
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 1256.2
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 1256.2
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 1254.3
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 1250.9
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 1250.4
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1242.4
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 1240.3
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 1239.5
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1238.6
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 1230.8
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 1226.1
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1224.4
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 1222.3
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 1221.9
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 1218.3
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 1217.7
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1211.7
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 1210.1
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 1204.0
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1202.2
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 1201.1
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1195.3
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1194.7
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1194.1
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 1191.8
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 1180.0
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 1179.9
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1173.5
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 1172.4
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 1168.4
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 1163.3
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 1154.6
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1145.8
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 1144.6
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 1139.8
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1123.0
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 1121.7
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 1119.3
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 1119.2
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1114.6
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 1112.2
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1104.6
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1101.4
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 1099.4
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 1049.1
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 1046.8
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 1038.4
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 1035.3
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 1034.4
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 1032.0
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1018.3
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 995.2
GTEX-1B932-0626-SM-731EM 40-49 years, female 978.8
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 970.0
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 961.7
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 934.3
GTEX-178AV-1426-SM-6LLID 40-49 years, male 930.4
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 929.5
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 805.4
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 712.8
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

52.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 52.7
FF:10199-103F1 23 years, male 52.7
Salivary gland
Scaled Tags Per Million: 24.2
FF:10093-102C3 16-60 years, mixed 24.2
Submaxillary gland
Scaled Tags Per Million: 42.5
FF:10202-103F4 24 years, male 42.5

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