PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:137.5 nTPM
FANTOM5:199.9 Scaled Tags Per Million
Pig:129.1 nTPM
Mouse:88.3 nTPM
Allen mouse:4.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 137.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 106.7
2188 Female, age 91, both hemispheres 137.3
2090 Male, age 80, both hemispheres 109.6
2301 Female, age 85, both hemispheres 105.1
1984 Male, age 76, both hemispheres 74.8
Area postrema
nTPM: 74.1
2306 Male, age 80, both hemispheres 95.9
2054 Male, age 76, both hemispheres 73.0
2799 Male, age 61, both hemispheres 53.5
Dorsal cochlear nucleus
nTPM: 95.5
2187 Female, age 91, both hemispheres 123.7
2378 Male, age 80, both hemispheres 104.7
2802 Male, age 74, right hemisphere 103.8
2058 Male, age 76, both hemispheres 80.8
2370 Male, age 61, both hemispheres 64.3
Dorsal medullary reticular nucleus
nTPM: 96.3
2040 Female, age 85, both hemispheres 131.8
2373 Male, age 61, both hemispheres 81.0
2088 Male, age 76, both hemispheres 76.2
Dorsal motor vagal complex
nTPM: 74.0
2133 Female, age 91, both hemispheres 95.5
2000 Male, age 74, unknown 85.5
2844 Male, age 55, unknown 77.3
2185 Male, age 76, both hemispheres 75.2
2813 Female, age 72, unknown 68.1
2643 Male, age 74, both hemispheres 65.2
2807 Female, age 85, both hemispheres 64.4
2797 Male, age 61, both hemispheres 61.1
Dorsal tegmental nucleus
nTPM: 78.0
2326 Male, age 74, both hemispheres 105.2
2083 Male, age 80, both hemispheres 83.7
1936 Male, age 76, left hemisphere 71.0
2358 Male, age 61, both hemispheres 52.0
Dorsolateral tegmental area
nTPM: 77.8
2751 Female, age 85, both hemispheres 116.1
2654 Male, age 80, both hemispheres 84.2
2360 Male, age 74, both hemispheres 80.4
2141 Male, age 76, both hemispheres 67.0
2337 Male, age 61, both hemispheres 41.3
Gigantocellular reticular nuclei, medullary
nTPM: 115.6
2387 Female, age 91, both hemispheres 166.3
2314 Male, age 61, both hemispheres 128.4
2462 Male, age 74, both hemispheres 123.2
1876 Female, age 85, both hemispheres 99.2
2310 Male, age 80, both hemispheres 97.0
2022 Male, age 76, right hemisphere 79.7
Gigantocellular reticular nuclei, pars
nTPM: 91.5
2706 Male, age 80, both hemispheres 102.9
2330 Male, age 80, both hemispheres 99.4
2168 Male, age 76, both hemispheres 90.9
2084 Female, age 85, both hemispheres 82.8
2336 Male, age 61, both hemispheres 81.2
Inferior olive
nTPM: 121.7
2563 Male, age 74, both hemispheres 166.0
2085 Female, age 85, both hemispheres 132.2
2379 Male, age 80, both hemispheres 119.6
2178 Male, age 61, both hemispheres 107.2
2628 Female, age 91, both hemispheres 83.5
Kolliker-Fuse nucleus
nTPM: 85.8
2793 Female, age 91, left hemisphere 106.9
2163 Male, age 80, both hemispheres 75.5
2315 Male, age 76, right hemisphere 75.0
Lateral lemniscal nuclei
nTPM: 102.2
2453 Male, age 74, right hemisphere 124.9
2036 Male, age 80, both hemispheres 117.6
2320 Female, age 91, left hemisphere 103.3
2169 Male, age 76, both hemispheres 95.1
2746 Female, age 85, left hemisphere 69.9
Lateral medullary reticular nucleus
nTPM: 104.6
2305 Male, age 74, both hemispheres 125.1
2190 Female, age 85, both hemispheres 124.7
2804 Female, age 91, both hemispheres 111.9
2852 Male, age 80, both hemispheres 92.6
2044 Male, age 76, both hemispheres 90.6
2374 Male, age 61, both hemispheres 82.4
Lateral parabrachial nucleus
nTPM: 80.6
2792 Male, age 76, both hemispheres 92.8
2013 Male, age 80, both hemispheres 82.3
2790 Male, age 61, both hemispheres 76.7
2139 Female, age 85, right hemisphere 70.8
Lateral vestibular nucleus
nTPM: 89.1
2311 Male, age 80, both hemispheres 109.9
2184 Male, age 76, both hemispheres 68.2
Locus coeruleus
nTPM: 95.6
2014 Male, age 55, unknown 118.7
2123 Female, age 91, both hemispheres 107.6
2788 Male, age 74, unknown 94.9
2317 Female, age 72, unknown 90.8
1980 Male, age 76, both hemispheres 88.4
2720 Male, age 74, both hemispheres 87.0
2162 Male, age 80, both hemispheres 81.9
Medial olivary nucleus
nTPM: 95.4
1962 Male, age 76, both hemispheres 122.5
2138 Female, age 91, both hemispheres 100.6
2851 Male, age 80, both hemispheres 85.3
1943 Male, age 61, both hemispheres 73.2
Medial parabrachial nucleus
nTPM: 88.6
2170 Female, age 91, both hemispheres 121.2
2463 Female, age 85, right hemisphere 94.2
2854 Male, age 80, both hemispheres 89.7
2786 Male, age 76, both hemispheres 73.3
2156 Male, age 61, both hemispheres 64.3
Medial periolivary nuclei
nTPM: 106.3
2791 Male, age 74, right hemisphere 172.0
2063 Male, age 76, both hemispheres 102.5
2458 Female, age 91, both hemispheres 98.2
2171 Female, age 85, both hemispheres 95.1
2081 Male, age 80, both hemispheres 63.8
Medial vestibular nucleus
nTPM: 110.8
2801 Male, age 74, both hemispheres 188.1
2093 Male, age 80, both hemispheres 111.4
2803 Female, age 91, both hemispheres 110.8
2743 Female, age 85, both hemispheres 95.6
2624 Male, age 61, both hemispheres 81.5
2134 Male, age 76, both hemispheres 77.3
Motor facial nucleus
nTPM: 113.4
2365 Male, age 74, right hemisphere 175.4
2795 Female, age 91, both hemispheres 136.3
2062 Male, age 76, both hemispheres 99.5
2327 Male, age 80, both hemispheres 98.3
2126 Male, age 61, both hemispheres 92.1
2697 Female, age 85, both hemispheres 78.5
Motor hypoglossal nucleus
nTPM: 104.4
2125 Female, age 91, both hemispheres 143.8
2132 Female, age 85, both hemispheres 121.3
2182 Male, age 80, both hemispheres 101.5
2461 Male, age 61, both hemispheres 85.6
2277 Male, age 76, both hemispheres 69.7
Motor trigeminal nucleus
nTPM: 87.2
2560 Male, age 74, both hemispheres 135.5
2079 Male, age 80, both hemispheres 89.7
2321 Female, age 91, both hemispheres 87.0
2309 Male, age 76, both hemispheres 67.1
2335 Male, age 61, both hemispheres 56.6
Nuclei of the trapezoid body
nTPM: 113.4
2368 Female, age 91, both hemispheres 139.2
2159 Male, age 61, both hemispheres 121.8
2735 Female, age 85, both hemispheres 115.5
1983 Male, age 76, both hemispheres 103.3
2166 Male, age 80, both hemispheres 87.4
Nucleus ambiguus
nTPM: 90.9
2071 Male, age 76, both hemispheres 115.3
2096 Female, age 85, both hemispheres 66.5
Nucleus cuneatus
nTPM: 100.1
2564 Male, age 74, both hemispheres 133.6
2380 Male, age 80, both hemispheres 129.8
2808 Female, age 85, both hemispheres 128.6
2381 Male, age 80, both hemispheres 112.7
2376 Male, age 61, both hemispheres 104.0
2562 Male, age 61, both hemispheres 80.3
2131 Male, age 76, both hemispheres 73.1
2100 Male, age 76, both hemispheres 72.5
2805 Female, age 91, both hemispheres 66.5
Nucleus gracilis
nTPM: 118.6
2627 Male, age 74, both hemispheres 141.9
2382 Male, age 80, both hemispheres 124.5
2299 Female, age 85, both hemispheres 89.5
Nucleus raphe magnus
nTPM: 110.6
2160 Male, age 61, both hemispheres 151.0
2455 Male, age 74, both hemispheres 143.9
2459 Female, age 91, both hemispheres 108.1
2328 Male, age 80, both hemispheres 103.3
2172 Female, age 85, both hemispheres 93.1
2051 Male, age 76, both hemispheres 64.2
Nucleus raphe obscurus
nTPM: 135.5
2845 Female, age 85, midline 175.6
2800 Male, age 61, midline 128.0
2142 Male, age 76, midline 102.9
Nucleus raphe pallidus
nTPM: 115.6
2145 Male, age 76, midline 124.3
2183 Male, age 80, midline 119.9
1924 Male, age 61, midline 102.7
Nucleus tractus solitarii
nTPM: 75.8
2144 Female, age 91, right hemisphere 113.2
2656 Male, age 76, both hemispheres 79.4
2191 Female, age 85, both hemispheres 61.0
2307 Male, age 80, both hemispheres 49.8
Paramedian reticular nucleus
nTPM: 115.0
2052 Male, age 76, both hemispheres 123.0
2057 Male, age 80, both hemispheres 117.2
2313 Male, age 61, both hemispheres 110.3
2050 Female, age 85, both hemispheres 109.4
Parvicellular reticular nuclei
nTPM: 89.3
2119 Male, age 80, both hemispheres 91.7
2558 Male, age 74, both hemispheres 90.6
2095 Male, age 76, both hemispheres 85.5
Parvicellular reticular nuclei, medullary
nTPM: 86.8
2091 Female, age 85, both hemispheres 92.1
2189 Female, age 91, both hemispheres 90.5
2181 Male, age 80, left hemisphere 77.8
Pedunculopontine tegmental nucleus
nTPM: 78.4
2334 Male, age 80, both hemispheres 88.6
1921 Female, age 85, both hemispheres 87.7
2338 Male, age 61, both hemispheres 59.0
Peritrigeminal nucleus
nTPM: 105.1
2067 Female, age 85, both hemispheres 116.7
2179 Male, age 61, both hemispheres 104.2
2136 Male, age 76, both hemispheres 94.5
Pontine nuclei
nTPM: 105.7
2727 Male, age 61, right hemisphere 153.8
2454 Male, age 74, left hemisphere 130.2
1863 Male, age 55, unknown 124.4
2109 Female, age 72, unknown 109.3
2319 Female, age 91, both hemispheres 99.3
2787 Female, age 85, both hemispheres 96.8
1968 Male, age 76, left hemisphere 85.6
2115 Male, age 80, left hemisphere 46.0
Pontine raphe nucleus
nTPM: 96.2
2122 Female, age 85, midline 106.5
2853 Male, age 76, midline 85.9
Posteroventral cochlear nucleus
nTPM: 104.9
2341 Male, age 80, both hemispheres 157.4
2135 Female, age 91, both hemispheres 110.5
2070 Male, age 76, both hemispheres 92.6
2752 Female, age 85, both hemispheres 88.8
2371 Male, age 61, both hemispheres 75.3
Prepositus hypoglossal nucleus
nTPM: 137.5
2855 Female, age 85, right hemisphere 187.3
2086 Male, age 80, both hemispheres 87.6
Principal sensory trigeminal nucleus
nTPM: 97.9
2158 Male, age 61, both hemispheres 123.2
2008 Male, age 80, left hemisphere 111.9
2367 Female, age 91, left hemisphere 91.6
2324 Male, age 76, both hemispheres 64.8
Reticular pontine nucleus, caudal
nTPM: 109.8
2457 Female, age 91, both hemispheres 152.3
2092 Male, age 76, both hemispheres 99.8
2559 Male, age 74, both hemispheres 96.8
2332 Male, age 80, right hemisphere 90.3
Reticular pontine nucleus, oral
nTPM: 103.4
2361 Male, age 74, both hemispheres 135.6
2366 Female, age 91, both hemispheres 118.4
2012 Female, age 85, both hemispheres 101.3
1939 Male, age 80, both hemispheres 85.0
2167 Male, age 76, both hemispheres 76.5
Reticulotegmental nucleus
nTPM: 87.5
2322 Female, age 91, both hemispheres 115.1
2452 Male, age 74, both hemispheres 83.3
2333 Male, age 80, both hemispheres 79.0
2325 Male, age 76, both hemispheres 72.6
Spinal trigeminal nucleus, caudal
nTPM: 91.4
2390 Female, age 91, both hemispheres 99.5
2308 Male, age 80, both hemispheres 93.7
2447 Male, age 76, both hemispheres 91.8
2312 Male, age 61, both hemispheres 89.7
2642 Male, age 74, both hemispheres 82.6
Spinal trigeminal nucleus, interpolar
nTPM: 94.7
2386 Female, age 85, both hemispheres 109.5
2033 Male, age 80, both hemispheres 98.6
2389 Female, age 91, both hemispheres 96.6
2066 Male, age 76, right hemisphere 92.5
2625 Male, age 61, both hemispheres 76.2
Spinal trigeminal nucleus, oral
nTPM: 80.2
2164 Male, age 80, both hemispheres 85.6
2737 Female, age 85, both hemispheres 82.4
1978 Male, age 76, both hemispheres 72.6
Spinal vestibular nucleus
nTPM: 98.9
2806 Female, age 85, both hemispheres 121.2
2384 Male, age 74, both hemispheres 105.9
2186 Female, age 91, both hemispheres 98.6
2748 Male, age 76, both hemispheres 94.8
2780 Male, age 80, both hemispheres 91.8
2796 Male, age 61, both hemispheres 81.3
Subcoeruleus area
nTPM: 84.3
2369 Female, age 85, left hemisphere 112.9
1958 Male, age 80, both hemispheres 88.6
2089 Male, age 76, left hemisphere 77.9
2323 Female, age 91, left hemisphere 77.8
2451 Male, age 74, both hemispheres 64.5
Superior olive
nTPM: 114.5
2364 Male, age 74, right hemisphere 174.4
1875 Female, age 85, both hemispheres 120.3
2020 Male, age 76, both hemispheres 105.1
2561 Female, age 91, both hemispheres 87.1
2329 Male, age 80, right hemisphere 85.4
Superior vestibular nucleus
nTPM: 101.3
2015 Male, age 80, both hemispheres 112.8
2383 Male, age 74, both hemispheres 107.8
2061 Male, age 76, both hemispheres 83.4
Ventral medullary reticular nucleus
nTPM: 99.9
2372 Male, age 61, both hemispheres 116.0
2060 Male, age 76, both hemispheres 83.8
Ventral periolivary nuclei
nTPM: 99.8
2165 Male, age 80, both hemispheres 113.0
2023 Male, age 76, both hemispheres 108.1
2130 Female, age 85, both hemispheres 94.4
2794 Female, age 91, left hemisphere 84.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 107.4
2741 Female, age 85, both hemispheres 120.1
2118 Male, age 80, both hemispheres 114.7
2302 Female, age 91, both hemispheres 112.4
2180 Male, age 61, both hemispheres 103.7
1986 Male, age 76, both hemispheres 85.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 98.2
2456 Female, age 91, both hemispheres 124.8
2449 Male, age 74, both hemispheres 122.9
2840 Female, age 85, both hemispheres 93.3
1959 Male, age 76, both hemispheres 93.2
2161 Male, age 80, both hemispheres 84.1
2359 Male, age 61, both hemispheres 71.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 199.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 102.8
FF:10165-103B3 76 years, female 105.8
FF:10182-103D2 60 years, female 99.8
Medulla oblongata
Scaled Tags Per Million: 125.7
FF:10038-101F2 18-64 years, mixed 156.3
FF:10155-103A2 76 years, female 118.8
FF:10174-103C3 60 years, female 102.0
Pons
Scaled Tags Per Million: 199.9
FF:10033-101E6 18-54 years, mixed 199.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 129.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 129.1
Samples: 4

Max nTPM: 168.2
Min nTPM: 99.1
Sample A Female 127.8
Sample B Female 99.1
Sample C Male 121.4
Sample D Male 168.2
Pons
nTPM: 119.8
Samples: 4

Max nTPM: 139.5
Min nTPM: 97.5
Sample A Female 97.5
Sample B Female 108.0
Sample C Male 134.1
Sample D Male 139.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 88.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 88.3
Samples: 4

Max nTPM: 96.9
Min nTPM: 83.2
Sample A Male 85.7
Sample B Male 87.4
Sample C Female 83.2
Sample D Female 96.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.5
75934914 Antisense, RP_060530_01_E06, Mouse strain C57BL/6J (56 days, male) 8.5
68632208 Antisense, RP_050125_01_H08, Mouse strain C57BL/6J (56 days, male) 4.3
70919639 Antisense, RP_050713_01_G04, Mouse strain C57BL/6J (56 days, male) 0.6
Pons
Expression energy: 4.1
75934914 Antisense, RP_060530_01_E06, Mouse strain C57BL/6J (56 days, male) 7.9
68632208 Antisense, RP_050125_01_H08, Mouse strain C57BL/6J (56 days, male) 4.2
70919639 Antisense, RP_050713_01_G04, Mouse strain C57BL/6J (56 days, male) 0.3

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