PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:90.8 nTPM
FANTOM5:110.6 Scaled Tags Per Million
Pig:67.5 nTPM
Mouse:45.3 nTPM
Allen mouse:6.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 90.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 59.8
2090 Male, age 80, both hemispheres 67.2
2301 Female, age 85, both hemispheres 62.3
1984 Male, age 76, both hemispheres 58.2
2188 Female, age 91, both hemispheres 51.5
Area postrema
nTPM: 78.7
2799 Male, age 61, both hemispheres 99.3
2306 Male, age 80, both hemispheres 75.5
2054 Male, age 76, both hemispheres 61.3
Dorsal cochlear nucleus
nTPM: 81.6
2802 Male, age 74, right hemisphere 98.1
2370 Male, age 61, both hemispheres 93.0
2378 Male, age 80, both hemispheres 83.7
2058 Male, age 76, both hemispheres 67.0
2187 Female, age 91, both hemispheres 66.3
Dorsal medullary reticular nucleus
nTPM: 68.7
2373 Male, age 61, both hemispheres 71.5
2040 Female, age 85, both hemispheres 69.5
2088 Male, age 76, both hemispheres 65.2
Dorsal motor vagal complex
nTPM: 77.2
2643 Male, age 74, both hemispheres 92.9
2844 Male, age 55, unknown 88.5
2797 Male, age 61, both hemispheres 82.8
2807 Female, age 85, both hemispheres 76.4
2813 Female, age 72, unknown 72.8
2133 Female, age 91, both hemispheres 71.0
2185 Male, age 76, both hemispheres 69.9
2000 Male, age 74, unknown 63.7
Dorsal tegmental nucleus
nTPM: 75.7
2358 Male, age 61, both hemispheres 101.7
2326 Male, age 74, both hemispheres 70.6
2083 Male, age 80, both hemispheres 65.7
1936 Male, age 76, left hemisphere 64.9
Dorsolateral tegmental area
nTPM: 75.0
2337 Male, age 61, both hemispheres 106.6
2141 Male, age 76, both hemispheres 73.0
2654 Male, age 80, both hemispheres 68.9
2360 Male, age 74, both hemispheres 65.1
2751 Female, age 85, both hemispheres 61.4
Gigantocellular reticular nuclei, medullary
nTPM: 68.1
2462 Male, age 74, both hemispheres 77.2
2387 Female, age 91, both hemispheres 75.7
2310 Male, age 80, both hemispheres 69.8
2022 Male, age 76, right hemisphere 64.2
1876 Female, age 85, both hemispheres 61.2
2314 Male, age 61, both hemispheres 60.3
Gigantocellular reticular nuclei, pars
nTPM: 70.3
2084 Female, age 85, both hemispheres 76.2
2706 Male, age 80, both hemispheres 73.0
2330 Male, age 80, both hemispheres 71.5
2168 Male, age 76, both hemispheres 67.4
2336 Male, age 61, both hemispheres 63.4
Inferior olive
nTPM: 83.6
2379 Male, age 80, both hemispheres 98.8
2563 Male, age 74, both hemispheres 84.4
2628 Female, age 91, both hemispheres 83.9
2085 Female, age 85, both hemispheres 79.1
2178 Male, age 61, both hemispheres 71.8
Kolliker-Fuse nucleus
nTPM: 59.7
2163 Male, age 80, both hemispheres 63.3
2793 Female, age 91, left hemisphere 59.2
2315 Male, age 76, right hemisphere 56.7
Lateral lemniscal nuclei
nTPM: 63.5
2453 Male, age 74, right hemisphere 73.6
2169 Male, age 76, both hemispheres 67.0
2746 Female, age 85, left hemisphere 61.0
2036 Male, age 80, both hemispheres 58.1
2320 Female, age 91, left hemisphere 57.7
Lateral medullary reticular nucleus
nTPM: 67.1
2804 Female, age 91, both hemispheres 83.5
2374 Male, age 61, both hemispheres 69.9
2852 Male, age 80, both hemispheres 66.8
2190 Female, age 85, both hemispheres 64.7
2305 Male, age 74, both hemispheres 61.0
2044 Male, age 76, both hemispheres 57.0
Lateral parabrachial nucleus
nTPM: 65.5
2790 Male, age 61, both hemispheres 72.4
2139 Female, age 85, right hemisphere 71.3
2013 Male, age 80, both hemispheres 64.9
2792 Male, age 76, both hemispheres 53.4
Lateral vestibular nucleus
nTPM: 69.0
2311 Male, age 80, both hemispheres 74.0
2184 Male, age 76, both hemispheres 63.9
Locus coeruleus
nTPM: 90.8
2317 Female, age 72, unknown 97.8
2014 Male, age 55, unknown 95.0
2123 Female, age 91, both hemispheres 91.8
1980 Male, age 76, both hemispheres 89.4
2720 Male, age 74, both hemispheres 88.8
2788 Male, age 74, unknown 88.4
2162 Male, age 80, both hemispheres 84.6
Medial olivary nucleus
nTPM: 67.0
2138 Female, age 91, both hemispheres 74.2
2851 Male, age 80, both hemispheres 71.5
1943 Male, age 61, both hemispheres 68.2
1962 Male, age 76, both hemispheres 54.3
Medial parabrachial nucleus
nTPM: 63.5
2786 Male, age 76, both hemispheres 70.2
2854 Male, age 80, both hemispheres 66.3
2156 Male, age 61, both hemispheres 64.8
2170 Female, age 91, both hemispheres 59.1
2463 Female, age 85, right hemisphere 57.3
Medial periolivary nuclei
nTPM: 67.4
2063 Male, age 76, both hemispheres 69.2
2791 Male, age 74, right hemisphere 68.8
2171 Female, age 85, both hemispheres 67.9
2458 Female, age 91, both hemispheres 66.5
2081 Male, age 80, both hemispheres 64.4
Medial vestibular nucleus
nTPM: 64.4
2624 Male, age 61, both hemispheres 74.4
2801 Male, age 74, both hemispheres 65.2
2134 Male, age 76, both hemispheres 64.0
2743 Female, age 85, both hemispheres 62.6
2093 Male, age 80, both hemispheres 60.5
2803 Female, age 91, both hemispheres 59.7
Motor facial nucleus
nTPM: 68.5
2795 Female, age 91, both hemispheres 92.5
2062 Male, age 76, both hemispheres 72.9
2365 Male, age 74, right hemisphere 65.6
2327 Male, age 80, both hemispheres 61.3
2126 Male, age 61, both hemispheres 60.6
2697 Female, age 85, both hemispheres 58.1
Motor hypoglossal nucleus
nTPM: 65.4
2182 Male, age 80, both hemispheres 73.3
2277 Male, age 76, both hemispheres 67.1
2461 Male, age 61, both hemispheres 65.6
2125 Female, age 91, both hemispheres 60.4
2132 Female, age 85, both hemispheres 60.3
Motor trigeminal nucleus
nTPM: 69.1
2335 Male, age 61, both hemispheres 80.9
2560 Male, age 74, both hemispheres 76.2
2321 Female, age 91, both hemispheres 63.3
2309 Male, age 76, both hemispheres 63.1
2079 Male, age 80, both hemispheres 62.0
Nuclei of the trapezoid body
nTPM: 62.7
2368 Female, age 91, both hemispheres 75.1
2735 Female, age 85, both hemispheres 71.7
1983 Male, age 76, both hemispheres 63.2
2166 Male, age 80, both hemispheres 58.5
2159 Male, age 61, both hemispheres 45.1
Nucleus ambiguus
nTPM: 65.9
2096 Female, age 85, both hemispheres 73.1
2071 Male, age 76, both hemispheres 58.8
Nucleus cuneatus
nTPM: 77.2
2805 Female, age 91, both hemispheres 99.2
2564 Male, age 74, both hemispheres 97.4
2562 Male, age 61, both hemispheres 76.2
2380 Male, age 80, both hemispheres 75.7
2808 Female, age 85, both hemispheres 72.5
2131 Male, age 76, both hemispheres 70.2
2381 Male, age 80, both hemispheres 69.1
2376 Male, age 61, both hemispheres 67.1
2100 Male, age 76, both hemispheres 67.0
Nucleus gracilis
nTPM: 76.1
2299 Female, age 85, both hemispheres 84.4
2627 Male, age 74, both hemispheres 74.9
2382 Male, age 80, both hemispheres 68.9
Nucleus raphe magnus
nTPM: 61.1
2051 Male, age 76, both hemispheres 67.3
2172 Female, age 85, both hemispheres 63.6
2455 Male, age 74, both hemispheres 62.7
2459 Female, age 91, both hemispheres 62.4
2328 Male, age 80, both hemispheres 59.5
2160 Male, age 61, both hemispheres 51.2
Nucleus raphe obscurus
nTPM: 56.0
2800 Male, age 61, midline 59.4
2845 Female, age 85, midline 59.0
2142 Male, age 76, midline 49.7
Nucleus raphe pallidus
nTPM: 61.8
2183 Male, age 80, midline 71.8
1924 Male, age 61, midline 56.9
2145 Male, age 76, midline 56.6
Nucleus tractus solitarii
nTPM: 72.5
2307 Male, age 80, both hemispheres 83.3
2656 Male, age 76, both hemispheres 76.0
2191 Female, age 85, both hemispheres 70.9
2144 Female, age 91, right hemisphere 59.9
Paramedian reticular nucleus
nTPM: 64.5
2313 Male, age 61, both hemispheres 75.8
2057 Male, age 80, both hemispheres 68.3
2050 Female, age 85, both hemispheres 62.9
2052 Male, age 76, both hemispheres 50.9
Parvicellular reticular nuclei
nTPM: 68.5
2558 Male, age 74, both hemispheres 79.8
2119 Male, age 80, both hemispheres 69.2
2095 Male, age 76, both hemispheres 56.6
Parvicellular reticular nuclei, medullary
nTPM: 72.3
2181 Male, age 80, left hemisphere 74.2
2091 Female, age 85, both hemispheres 72.4
2189 Female, age 91, both hemispheres 70.3
Pedunculopontine tegmental nucleus
nTPM: 75.3
2338 Male, age 61, both hemispheres 80.7
1921 Female, age 85, both hemispheres 75.9
2334 Male, age 80, both hemispheres 69.2
Peritrigeminal nucleus
nTPM: 61.0
2067 Female, age 85, both hemispheres 71.1
2179 Male, age 61, both hemispheres 58.1
2136 Male, age 76, both hemispheres 53.8
Pontine nuclei
nTPM: 57.7
2115 Male, age 80, left hemisphere 67.9
1968 Male, age 76, left hemisphere 66.0
2787 Female, age 85, both hemispheres 62.6
1863 Male, age 55, unknown 59.9
2109 Female, age 72, unknown 57.9
2319 Female, age 91, both hemispheres 54.0
2727 Male, age 61, right hemisphere 47.5
2454 Male, age 74, left hemisphere 45.9
Pontine raphe nucleus
nTPM: 75.1
2853 Male, age 76, midline 84.4
2122 Female, age 85, midline 65.9
Posteroventral cochlear nucleus
nTPM: 64.8
2371 Male, age 61, both hemispheres 88.4
2752 Female, age 85, both hemispheres 71.7
2341 Male, age 80, both hemispheres 57.7
2070 Male, age 76, both hemispheres 57.4
2135 Female, age 91, both hemispheres 49.0
Prepositus hypoglossal nucleus
nTPM: 68.6
2086 Male, age 80, both hemispheres 74.9
2855 Female, age 85, right hemisphere 62.3
Principal sensory trigeminal nucleus
nTPM: 58.6
2324 Male, age 76, both hemispheres 63.9
2008 Male, age 80, left hemisphere 60.7
2367 Female, age 91, left hemisphere 55.7
2158 Male, age 61, both hemispheres 54.3
Reticular pontine nucleus, caudal
nTPM: 62.2
2457 Female, age 91, both hemispheres 63.6
2332 Male, age 80, right hemisphere 62.6
2092 Male, age 76, both hemispheres 62.3
2559 Male, age 74, both hemispheres 60.1
Reticular pontine nucleus, oral
nTPM: 58.7
2167 Male, age 76, both hemispheres 72.3
1939 Male, age 80, both hemispheres 62.0
2012 Female, age 85, both hemispheres 59.0
2366 Female, age 91, both hemispheres 51.3
2361 Male, age 74, both hemispheres 48.8
Reticulotegmental nucleus
nTPM: 73.4
2452 Male, age 74, both hemispheres 82.2
2325 Male, age 76, both hemispheres 72.1
2333 Male, age 80, both hemispheres 70.1
2322 Female, age 91, both hemispheres 69.4
Spinal trigeminal nucleus, caudal
nTPM: 69.1
2642 Male, age 74, both hemispheres 79.0
2390 Female, age 91, both hemispheres 71.4
2308 Male, age 80, both hemispheres 69.9
2447 Male, age 76, both hemispheres 68.5
2312 Male, age 61, both hemispheres 56.7
Spinal trigeminal nucleus, interpolar
nTPM: 69.7
2625 Male, age 61, both hemispheres 74.9
2389 Female, age 91, both hemispheres 73.1
2033 Male, age 80, both hemispheres 71.3
2386 Female, age 85, both hemispheres 68.8
2066 Male, age 76, right hemisphere 60.6
Spinal trigeminal nucleus, oral
nTPM: 65.6
2164 Male, age 80, both hemispheres 67.9
1978 Male, age 76, both hemispheres 67.0
2737 Female, age 85, both hemispheres 61.8
Spinal vestibular nucleus
nTPM: 69.3
2796 Male, age 61, both hemispheres 87.3
2384 Male, age 74, both hemispheres 75.3
2780 Male, age 80, both hemispheres 67.9
2806 Female, age 85, both hemispheres 65.2
2186 Female, age 91, both hemispheres 62.0
2748 Male, age 76, both hemispheres 58.1
Subcoeruleus area
nTPM: 71.3
2451 Male, age 74, both hemispheres 89.0
2323 Female, age 91, left hemisphere 80.2
2089 Male, age 76, left hemisphere 68.3
1958 Male, age 80, both hemispheres 63.2
2369 Female, age 85, left hemisphere 56.0
Superior olive
nTPM: 64.2
2561 Female, age 91, both hemispheres 72.7
2020 Male, age 76, both hemispheres 63.9
2364 Male, age 74, right hemisphere 63.2
2329 Male, age 80, right hemisphere 62.1
1875 Female, age 85, both hemispheres 59.3
Superior vestibular nucleus
nTPM: 65.2
2015 Male, age 80, both hemispheres 65.7
2061 Male, age 76, both hemispheres 65.2
2383 Male, age 74, both hemispheres 64.5
Ventral medullary reticular nucleus
nTPM: 68.8
2372 Male, age 61, both hemispheres 72.2
2060 Male, age 76, both hemispheres 65.4
Ventral periolivary nuclei
nTPM: 66.5
2130 Female, age 85, both hemispheres 74.0
2794 Female, age 91, left hemisphere 73.9
2165 Male, age 80, both hemispheres 60.6
2023 Male, age 76, both hemispheres 57.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 66.8
2302 Female, age 91, both hemispheres 76.7
2118 Male, age 80, both hemispheres 71.6
2741 Female, age 85, both hemispheres 66.2
2180 Male, age 61, both hemispheres 64.4
1986 Male, age 76, both hemispheres 55.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 73.5
2359 Male, age 61, both hemispheres 100.5
2456 Female, age 91, both hemispheres 73.9
2161 Male, age 80, both hemispheres 69.4
2449 Male, age 74, both hemispheres 68.4
2840 Female, age 85, both hemispheres 66.4
1959 Male, age 76, both hemispheres 62.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 110.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 110.6
FF:10182-103D2 60 years, female 122.8
FF:10165-103B3 76 years, female 98.4
Medulla oblongata
Scaled Tags Per Million: 102.7
FF:10038-101F2 18-64 years, mixed 136.2
FF:10155-103A2 76 years, female 86.4
FF:10174-103C3 60 years, female 85.4
Pons
Scaled Tags Per Million: 94.1
FF:10033-101E6 18-54 years, mixed 94.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 67.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 57.8
Samples: 4

Max nTPM: 62.0
Min nTPM: 51.8
Sample A Female 51.8
Sample B Female 62.0
Sample C Male 57.2
Sample D Male 60.0
Pons
nTPM: 67.5
Samples: 4

Max nTPM: 86.0
Min nTPM: 56.7
Sample A Female 86.0
Sample B Female 64.0
Sample C Male 63.4
Sample D Male 56.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 45.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 45.3
Samples: 4

Max nTPM: 49.5
Min nTPM: 42.8
Sample A Male 49.5
Sample B Male 45.4
Sample C Female 42.8
Sample D Female 43.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.0
512991 Antisense, RP_040809_02_F09, Mouse strain C57BL/6J (56 days, male) 9.0
81599648 Antisense, RP_071212_04_F09, Mouse strain C57BL/6J (56 days, male) 2.9
Pons
Expression energy: 5.6
512991 Antisense, RP_040809_02_F09, Mouse strain C57BL/6J (56 days, male) 8.4
81599648 Antisense, RP_071212_04_F09, Mouse strain C57BL/6J (56 days, male) 2.8

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