HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:2.8 nTPM
HPA Brain:13.2 nTPM
GTEx:2.8 nTPM
FANTOM5:36.7 Scaled Tags Per Million
Mouse:6.0 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024359Antibody HPA024759
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 13.2
Sample id Sample description nTPM
Hippocampus
nTPM: 12.2
2148 Female, age 91, left hemisphere 15.4
1855 Male, age 76, left hemisphere 13.5
2621 Female, age 67, right hemisphere 12.1
1911 Female, age 85, right hemisphere 11.4
2529 Female, age 94, left hemisphere 10.7
1898 Male, age 80, left hemisphere 10.0
Dentate gyrus
nTPM: 13.0
2531 Female, age 67, both hemispheres 17.1
1927 Female, age 91, both hemispheres 13.7
2528 Male, age 74, both hemispheres 13.0
2246 Female, age 85, both hemispheres 12.6
2010 Male, age 76, both hemispheres 11.1
2530 Female, age 94, left hemisphere 10.7
Entorhinal gyrus
nTPM: 12.4
2613 Female, age 94, left hemisphere 14.5
2686 Male, age 75, right hemisphere 13.8
1787 Male, age 76, left hemisphere 12.4
2764 Male, age 80, right hemisphere 11.9
2117 Female, age 91, right hemisphere 11.0
1938 Female, age 85, left hemisphere 10.8
Hippocampus, CA1
nTPM: 12.4
2045 Male, age 76, both hemispheres 12.8
2082 Female, age 91, right hemisphere 12.8
2527 Male, age 74, both hemispheres 12.5
2749 Male, age 80, left hemisphere 12.0
1873 Female, age 85, both hemispheres 11.6
Hippocampus, CA2
nTPM: 11.6
1963 Male, age 80, left hemisphere 12.6
2113 Female, age 91, right hemisphere 12.3
2437 Female, age 94, left hemisphere 12.1
1940 Female, age 85, left hemisphere 11.5
1892 Male, age 76, both hemispheres 10.9
2249 Male, age 74, both hemispheres 10.2
Hippocampus, CA3
nTPM: 13.2
2620 Female, age 94, left hemisphere 19.2
2861 Female, age 67, both hemispheres 15.6
1891 Female, age 85, both hemispheres 12.2
2137 Male, age 80, left hemisphere 12.1
2436 Male, age 74, both hemispheres 10.7
1867 Male, age 76, both hemispheres 9.4
Parahippocampal cortex
nTPM: 12.5
2622 Female, age 67, right hemisphere 15.9
2693 Female, age 94, both hemispheres 13.7
2692 Male, age 74, both hemispheres 12.7
2245 Female, age 91, both hemispheres 12.5
2532 Female, age 72, left hemisphere 12.5
2250 Female, age 67, right hemisphere 12.2
1850 Male, age 80, both hemispheres 11.7
1990 Female, age 91, right hemisphere 11.5
2018 Male, age 76, both hemispheres 11.3
1933 Female, age 85, both hemispheres 11.1
Perirhinal gyrus
nTPM: 11.5
2848 Male, age 76, right hemisphere 12.7
2521 Female, age 94, right hemisphere 11.5
1847 Female, age 91, left hemisphere 11.1
1794 Male, age 80, right hemisphere 11.0
1841 Female, age 85, right hemisphere 11.0
Subiculum
nTPM: 11.7
2729 Female, age 91, right hemisphere 14.5
2619 Male, age 74, both hemispheres 13.0
1901 Male, age 80, both hemispheres 11.3
2042 Male, age 76, both hemispheres 11.3
1977 Female, age 85, both hemispheres 10.9
2438 Female, age 94, left hemisphere 9.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 2.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.8
Samples: 197

Max nTPM: 5.6
Min nTPM: 0.8
Std nTPM: 0.7
Median nTPM: 2.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 5.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 5.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 4.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 4.8
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 4.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 4.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 4.4
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 4.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 4.3
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 4.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 4.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 36.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.7
FF:10153-102I9 76 years, female 38.2
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 6.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.9
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.3
Sample A Male 5.3
Sample B Male 6.0
Sample C Female 5.4
Sample D Female 6.8
Hippocampal formation
nTPM: 6.0
Samples: 4

Max nTPM: 6.6
Min nTPM: 4.7
Sample A Male 4.7
Sample B Male 6.6
Sample C Female 6.3
Sample D Female 6.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68920419 Antisense, RP_050301_02_H10, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org