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SARM1
HPA
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  • SARM1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SARM1
Synonyms KIAA0524, SAMD2, SARM
Gene descriptioni

Full gene name according to HGNC.

Sterile alpha and TIR motif containing 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q11.2
Chromosome location (bp) 28364356 - 28404049
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000004139 (version 109)
Entrez gene 23098
HGNC HGNC:17074
UniProt Q6SZW1 (UniProt - Evidence at protein level)
neXtProt NX_Q6SZW1
GeneCards SARM1
Antibodypedia SARM1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

NAD(+) hydrolase, which plays a key role in axonal degeneration following injury by regulating NAD(+) metabolism 1, 2, 3. Acts as a negative regulator of MYD88- and TRIF-dependent toll-like receptor signaling pathway by promoting Wallerian degeneration, an injury-induced form of programmed subcellular death which involves degeneration of an axon distal to the injury site 4, 5, 6, 7. Wallerian degeneration is triggered by NAD(+) depletion: in response to injury, SARM1 is activated and catalyzes cleavage of NAD(+) into ADP-D-ribose (ADPR), cyclic ADPR (cADPR) and nicotinamide; NAD(+) cleavage promoting cytoskeletal degradation and axon destruction 8, 9, 10, 11, 12, 13, 14, 15, 16. Also able to hydrolyze NADP(+), but not other NAD(+)-related molecules 17. Can activate neuronal cell death in response to stress 18. Regulates dendritic arborization through the MAPK4-JNK pathway (By similarity). Involved in innate immune response: inhibits both TICAM1/TRIF- and MYD88-dependent activation of JUN/AP-1, TRIF-dependent activation of NF-kappa-B and IRF3, and the phosphorylation of MAPK14/p38 19.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation, Immunity, Innate immunity, Neurogenesis
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

NAD
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables NAD+ nucleotidase, cyclic ADP-ribose generating and identical protein binding activity. Involved in NAD catabolic process; positive regulation of neuron death; and response to axon injury. Located in mitochondrion. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SARM1-203
ENSP00000462479
ENST00000578128
J3KSG7
[Direct mapping] NAD(+) hydrolase SARM1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0003953 [NAD+ nucleosidase activity]
GO:0005515 [protein binding]
GO:0007165 [signal transduction]
GO:0034128 [negative regulation of MyD88-independent toll-like receptor signaling pathway]
GO:0035591 [signaling adaptor activity]
GO:0048678 [response to axon injury]
GO:1901564 [organonitrogen compound metabolic process]
Show all
257 aa
28.1 kDa
No 0
SARM1-204
ENSP00000462228
ENST00000579593
J3KRZ6
[Direct mapping] NAD(+) hydrolase SARM1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003953 [NAD+ nucleosidase activity]
GO:0007165 [signal transduction]
GO:0034128 [negative regulation of MyD88-independent toll-like receptor signaling pathway]
GO:0035591 [signaling adaptor activity]
GO:0048678 [response to axon injury]
Show all
107 aa
11.8 kDa
No 0
SARM1-208
ENSP00000468032
ENST00000585482
Q6SZW1
[Direct mapping] NAD(+) hydrolase SARM1
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Phobius predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002376 [immune system process]
GO:0003953 [NAD+ nucleosidase activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005741 [mitochondrial outer membrane]
GO:0005829 [cytosol]
GO:0005874 [microtubule]
GO:0007165 [signal transduction]
GO:0007399 [nervous system development]
GO:0009749 [response to glucose]
GO:0015630 [microtubule cytoskeleton]
GO:0016787 [hydrolase activity]
GO:0019677 [NAD catabolic process]
GO:0030154 [cell differentiation]
GO:0030424 [axon]
GO:0030425 [dendrite]
GO:0034128 [negative regulation of MyD88-independent toll-like receptor signaling pathway]
GO:0035591 [signaling adaptor activity]
GO:0042802 [identical protein binding]
GO:0042995 [cell projection]
GO:0043523 [regulation of neuron apoptotic process]
GO:0045087 [innate immune response]
GO:0045202 [synapse]
GO:0048678 [response to axon injury]
GO:0048814 [regulation of dendrite morphogenesis]
GO:0050135 [NAD(P)+ nucleosidase activity]
GO:0061809 [NAD+ nucleotidase, cyclic ADP-ribose generating]
GO:1901214 [regulation of neuron death]
GO:1901216 [positive regulation of neuron death]
Show all
724 aa
79.4 kDa
No 0

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