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SINGLE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:4.7 nTPM
Monaco:7.6 nTPM
Schmiedel:62.7 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

4.7
HPA sample nTPM
Classical monocyte
nTPM: 2.0
Samples: 6

Max nTPM: 2.9
Min nTPM: 0.8
P10809_1003 0.8
P10809_1020 2.9
P10809_1039 2.2
P10809_1058 1.6
P10809_1080 2.1
P10809_1107 2.2
Intermediate monocyte
nTPM: 4.0
Samples: 6

Max nTPM: 6.6
Min nTPM: 1.4
P10809_1004 4.4
P10809_1023 2.3
P10809_1042 5.1
P10809_1061 3.9
P10809_1081 1.4
P10809_1108 6.6
Non-classical monocyte
nTPM: 4.7
Samples: 5

Max nTPM: 12.9
Min nTPM: 1.5
P10809_1005 1.5
P10809_1053 3.1
P10809_1072 12.9
P10809_1082 1.9
P10809_1109 4.1

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

7.6
Monaco sample nTPM
Classical monocyte
nTPM: 7.6
Samples: 4

Max nTPM: 14.9
Min nTPM: 4.6
RHH5313_R3680 4.6
RHH5221_R3593 5.0
RHH5250_R3622 5.7
RHH5279_R3651 14.9
Intermediate monocyte
nTPM: 6.0
Samples: 4

Max nTPM: 9.0
Min nTPM: 3.8
RHH5314_R3681 6.2
RHH5222_R3594 3.8
RHH5251_R3623 9.0
RHH5280_R3652 4.9
Non-classical monocyte
nTPM: 7.5
Samples: 4

Max nTPM: 15.1
Min nTPM: 4.8
RHH5315_R3682 5.0
RHH5223_R3595 5.0
RHH5252_R3624 15.1
RHH5281_R3653 4.8

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

62.7
Schmiedel sample id TPM
Classical monocyte
TPM: 44.1
Samples: 91

Max TPM: 58.6
Min TPM: 34.3
MONOCYTES_1 58.6
MONOCYTES_2 55.5
MONOCYTES_3 53.6
MONOCYTES_4 51.9
MONOCYTES_5 51.6
MONOCYTES_6 51.5
MONOCYTES_7 50.9
MONOCYTES_8 50.5
MONOCYTES_9 50.0
MONOCYTES_10 49.3
MONOCYTES_11 49.0
MONOCYTES_12 48.6
MONOCYTES_13 48.6
MONOCYTES_14 48.5
MONOCYTES_15 48.4
MONOCYTES_16 48.4
MONOCYTES_17 48.1
MONOCYTES_18 48.0
MONOCYTES_19 48.0
MONOCYTES_20 47.9
MONOCYTES_21 46.9
MONOCYTES_22 46.8
MONOCYTES_23 46.7
MONOCYTES_24 46.5
MONOCYTES_25 46.5
MONOCYTES_26 46.3
MONOCYTES_27 46.2
MONOCYTES_28 46.1
MONOCYTES_29 46.1
MONOCYTES_30 46.0
MONOCYTES_31 45.7
MONOCYTES_32 45.5
MONOCYTES_33 45.3
MONOCYTES_34 45.1
MONOCYTES_35 44.9
MONOCYTES_36 44.9
MONOCYTES_37 44.8
MONOCYTES_38 44.6
MONOCYTES_39 44.6
MONOCYTES_40 44.3
MONOCYTES_41 44.1
MONOCYTES_42 44.0
MONOCYTES_43 44.0
MONOCYTES_44 43.8
MONOCYTES_45 43.8
MONOCYTES_46 43.8
MONOCYTES_47 43.8
MONOCYTES_48 43.8
MONOCYTES_49 43.7
MONOCYTES_50 43.6
MONOCYTES_51 43.5
MONOCYTES_52 43.5
MONOCYTES_53 43.4
MONOCYTES_54 43.4
MONOCYTES_55 43.3
MONOCYTES_56 43.1
MONOCYTES_57 43.1
MONOCYTES_58 42.8
MONOCYTES_59 42.7
MONOCYTES_60 42.6
MONOCYTES_61 42.5
MONOCYTES_62 42.4
MONOCYTES_63 42.3
MONOCYTES_64 42.3
MONOCYTES_65 42.2
MONOCYTES_66 42.1
MONOCYTES_67 41.7
MONOCYTES_68 41.7
MONOCYTES_69 41.4
MONOCYTES_70 41.2
MONOCYTES_71 41.1
MONOCYTES_72 41.1
MONOCYTES_73 40.6
MONOCYTES_74 40.4
MONOCYTES_75 39.9
MONOCYTES_76 39.7
MONOCYTES_77 39.5
MONOCYTES_78 38.7
MONOCYTES_79 38.5
MONOCYTES_80 38.5
MONOCYTES_81 38.3
MONOCYTES_82 38.3
MONOCYTES_83 37.5
MONOCYTES_84 37.4
MONOCYTES_85 37.4
MONOCYTES_86 36.8
MONOCYTES_87 36.5
MONOCYTES_88 36.4
MONOCYTES_89 35.4
MONOCYTES_90 34.5
MONOCYTES_91 34.3
Show allShow less
Non-classical monocyte
TPM: 62.7
Samples: 90

Max TPM: 84.3
Min TPM: 48.7
M2_1 84.3
M2_2 78.5
M2_3 77.9
M2_4 74.5
M2_5 73.5
M2_6 73.3
M2_7 72.5
M2_8 71.3
M2_9 70.9
M2_10 70.6
M2_11 69.5
M2_12 69.4
M2_13 69.3
M2_14 69.2
M2_15 68.5
M2_16 68.5
M2_17 67.8
M2_18 67.8
M2_19 67.8
M2_20 67.4
M2_21 67.2
M2_22 67.0
M2_23 66.9
M2_24 66.9
M2_25 66.9
M2_26 66.8
M2_27 66.1
M2_28 65.4
M2_29 64.9
M2_30 64.8
M2_31 64.1
M2_32 64.1
M2_33 63.8
M2_34 63.5
M2_35 63.5
M2_36 63.4
M2_37 63.2
M2_38 63.1
M2_39 63.0
M2_40 63.0
M2_41 62.8
M2_42 62.6
M2_43 62.5
M2_44 62.5
M2_45 62.5
M2_46 62.5
M2_47 62.2
M2_48 62.2
M2_49 62.1
M2_50 61.7
M2_51 61.3
M2_52 61.1
M2_53 61.0
M2_54 60.9
M2_55 60.8
M2_56 60.6
M2_57 60.3
M2_58 59.9
M2_59 59.8
M2_60 59.8
M2_61 59.7
M2_62 59.6
M2_63 59.4
M2_64 59.4
M2_65 59.1
M2_66 58.9
M2_67 58.9
M2_68 58.8
M2_69 58.7
M2_70 57.8
M2_71 57.7
M2_72 57.6
M2_73 57.0
M2_74 56.6
M2_75 56.3
M2_76 56.1
M2_77 56.1
M2_78 56.0
M2_79 55.7
M2_80 55.6
M2_81 55.6
M2_82 55.2
M2_83 55.1
M2_84 55.0
M2_85 54.2
M2_86 53.3
M2_87 51.0
M2_88 49.9
M2_89 49.1
M2_90 48.7
Show allShow less

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