HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:4.7 nTPM
HPA Brain:9.1 nTPM
GTEx:4.7 nTPM
FANTOM5:17.9 Scaled Tags Per Million
Pig:6.4 nTPM
Mouse:13.9 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB009743Antibody CAB080253
Glial cells MediumHigh
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 9.1
Sample id Sample description nTPM
Hippocampus
nTPM: 8.4
1898 Male, age 80, left hemisphere 10.6
1911 Female, age 85, right hemisphere 9.4
2148 Female, age 91, left hemisphere 8.2
1855 Male, age 76, left hemisphere 7.8
2529 Female, age 94, left hemisphere 7.1
2621 Female, age 67, right hemisphere 7.0
Dentate gyrus
nTPM: 7.9
2530 Female, age 94, left hemisphere 9.1
2528 Male, age 74, both hemispheres 8.7
1927 Female, age 91, both hemispheres 8.0
2010 Male, age 76, both hemispheres 7.8
2246 Female, age 85, both hemispheres 7.6
2531 Female, age 67, both hemispheres 6.2
Entorhinal gyrus
nTPM: 8.0
2117 Female, age 91, right hemisphere 10.0
1938 Female, age 85, left hemisphere 9.1
2613 Female, age 94, left hemisphere 8.4
2686 Male, age 75, right hemisphere 7.2
1787 Male, age 76, left hemisphere 7.0
2764 Male, age 80, right hemisphere 6.5
Hippocampus, CA1
nTPM: 8.0
2527 Male, age 74, both hemispheres 9.1
1873 Female, age 85, both hemispheres 9.0
2082 Female, age 91, right hemisphere 8.2
2045 Male, age 76, both hemispheres 6.9
2749 Male, age 80, left hemisphere 6.8
Hippocampus, CA2
nTPM: 8.4
1963 Male, age 80, left hemisphere 9.1
1892 Male, age 76, both hemispheres 8.8
2249 Male, age 74, both hemispheres 8.8
1940 Female, age 85, left hemisphere 8.7
2437 Female, age 94, left hemisphere 7.6
2113 Female, age 91, right hemisphere 7.2
Hippocampus, CA3
nTPM: 8.1
1891 Female, age 85, both hemispheres 9.2
1867 Male, age 76, both hemispheres 9.0
2436 Male, age 74, both hemispheres 8.6
2861 Female, age 67, both hemispheres 7.5
2137 Male, age 80, left hemisphere 7.4
2620 Female, age 94, left hemisphere 7.1
Parahippocampal cortex
nTPM: 7.7
1990 Female, age 91, right hemisphere 9.1
2018 Male, age 76, both hemispheres 9.0
2532 Female, age 72, left hemisphere 8.9
2245 Female, age 91, both hemispheres 8.0
1933 Female, age 85, both hemispheres 7.7
1850 Male, age 80, both hemispheres 7.5
2250 Female, age 67, right hemisphere 7.4
2693 Female, age 94, both hemispheres 6.7
2622 Female, age 67, right hemisphere 6.4
2692 Male, age 74, both hemispheres 6.4
Perirhinal gyrus
nTPM: 7.7
1841 Female, age 85, right hemisphere 9.0
2521 Female, age 94, right hemisphere 8.3
2848 Male, age 76, right hemisphere 7.4
1794 Male, age 80, right hemisphere 7.1
1847 Female, age 91, left hemisphere 6.6
Subiculum
nTPM: 9.1
2042 Male, age 76, both hemispheres 10.2
2438 Female, age 94, left hemisphere 9.7
1977 Female, age 85, both hemispheres 9.2
1901 Male, age 80, both hemispheres 9.0
2729 Female, age 91, right hemisphere 8.4
2619 Male, age 74, both hemispheres 7.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 4.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.7
Samples: 255

Max nTPM: 10.7
Min nTPM: 1.5
Std nTPM: 1.5
Median nTPM: 4.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 10.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 10.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 9.9
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 9.3
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 8.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 8.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 8.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 8.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 7.8
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 7.6
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 7.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.9
FF:10153-102I9 76 years, female 22.4
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 6.4
Pig sample Sample description nTPM
Subiculum
nTPM: 5.7
Samples: 4

Max nTPM: 6.3
Min nTPM: 4.9
Sample A Female 4.9
Sample B Female 5.8
Sample C Male 5.8
Sample D Male 6.3
Dorsal hippocampus
nTPM: 6.4
Samples: 4

Max nTPM: 6.6
Min nTPM: 6.1
Sample A Female 6.5
Sample B Female 6.1
Sample C Male 6.6
Sample D Male 6.3
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 6.2
Min nTPM: 5.1
Sample A Female 5.6
Sample B Female 5.5
Sample C Male 5.1
Sample D Male 6.2
Ventral hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.2
Sample A Female 6.8
Sample B Female 6.4
Sample C Male 4.2
Sample D Male 6.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 13.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 20.7
Min nTPM: 9.1
Sample A Male 20.7
Sample B Male 11.3
Sample C Female 12.0
Sample D Female 9.1
Hippocampal formation
nTPM: 13.9
Samples: 4

Max nTPM: 17.1
Min nTPM: 12.5
Sample A Male 13.0
Sample B Male 12.9
Sample C Female 12.5
Sample D Female 17.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69015524 Antisense, RP_050315_01_B07, Mouse strain C57BL/6J (56 days, male) 0.5

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