HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:9.1 nTPM
HPA Brain:11.5 nTPM
GTEx:9.1 nTPM
FANTOM5:64.4 Scaled Tags Per Million
Pig:49.9 nTPM
Mouse:35.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026679
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 11.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
1855 Male, age 76, left hemisphere 14.6
1911 Female, age 85, right hemisphere 12.0
1898 Male, age 80, left hemisphere 10.6
2148 Female, age 91, left hemisphere 10.4
2621 Female, age 67, right hemisphere 10.2
2529 Female, age 94, left hemisphere 10.0
Dentate gyrus
nTPM: 10.4
1927 Female, age 91, both hemispheres 13.1
2010 Male, age 76, both hemispheres 13.1
2246 Female, age 85, both hemispheres 9.6
2528 Male, age 74, both hemispheres 9.5
2531 Female, age 67, both hemispheres 8.7
2530 Female, age 94, left hemisphere 8.4
Entorhinal gyrus
nTPM: 9.9
2686 Male, age 75, right hemisphere 10.4
2613 Female, age 94, left hemisphere 10.3
2764 Male, age 80, right hemisphere 10.2
1938 Female, age 85, left hemisphere 9.9
1787 Male, age 76, left hemisphere 9.6
2117 Female, age 91, right hemisphere 8.8
Hippocampus, CA1
nTPM: 11.5
2749 Male, age 80, left hemisphere 13.9
1873 Female, age 85, both hemispheres 13.1
2045 Male, age 76, both hemispheres 10.4
2082 Female, age 91, right hemisphere 10.2
2527 Male, age 74, both hemispheres 9.9
Hippocampus, CA2
nTPM: 11.4
1963 Male, age 80, left hemisphere 15.9
1892 Male, age 76, both hemispheres 13.0
2437 Female, age 94, left hemisphere 10.1
2113 Female, age 91, right hemisphere 9.9
2249 Male, age 74, both hemispheres 9.9
1940 Female, age 85, left hemisphere 9.5
Hippocampus, CA3
nTPM: 11.3
2137 Male, age 80, left hemisphere 13.2
2620 Female, age 94, left hemisphere 11.7
1867 Male, age 76, both hemispheres 11.1
2436 Male, age 74, both hemispheres 10.9
1891 Female, age 85, both hemispheres 10.8
2861 Female, age 67, both hemispheres 9.9
Parahippocampal cortex
nTPM: 11.0
2018 Male, age 76, both hemispheres 12.6
1850 Male, age 80, both hemispheres 12.4
2693 Female, age 94, both hemispheres 12.1
2532 Female, age 72, left hemisphere 11.6
1933 Female, age 85, both hemispheres 11.2
2245 Female, age 91, both hemispheres 10.9
1990 Female, age 91, right hemisphere 10.7
2622 Female, age 67, right hemisphere 9.5
2250 Female, age 67, right hemisphere 9.4
2692 Male, age 74, both hemispheres 9.3
Perirhinal gyrus
nTPM: 11.4
2848 Male, age 76, right hemisphere 13.5
1847 Female, age 91, left hemisphere 11.9
1841 Female, age 85, right hemisphere 11.5
1794 Male, age 80, right hemisphere 11.3
2521 Female, age 94, right hemisphere 9.0
Subiculum
nTPM: 10.9
1977 Female, age 85, both hemispheres 13.6
1901 Male, age 80, both hemispheres 13.2
2438 Female, age 94, left hemisphere 11.1
2729 Female, age 91, right hemisphere 11.1
2619 Male, age 74, both hemispheres 8.5
2042 Male, age 76, both hemispheres 8.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.1
Samples: 197

Max nTPM: 20.9
Min nTPM: 3.0
Std nTPM: 3.6
Median nTPM: 8.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 20.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 20.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 19.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 19.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 18.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 18.1
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 17.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 17.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 16.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 16.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 15.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 64.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.4
FF:10169-103B7 60 years, female 84.1
FF:10153-102I9 76 years, female 44.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 49.9
Pig sample Sample description nTPM
Subiculum
nTPM: 36.1
Samples: 4

Max nTPM: 43.0
Min nTPM: 30.6
Sample A Female 43.0
Sample B Female 35.6
Sample C Male 30.6
Sample D Male 35.1
Dorsal hippocampus
nTPM: 49.9
Samples: 4

Max nTPM: 59.9
Min nTPM: 36.6
Sample A Female 59.9
Sample B Female 48.8
Sample C Male 54.3
Sample D Male 36.6
Entorhinal cortex
nTPM: 37.5
Samples: 4

Max nTPM: 46.1
Min nTPM: 31.3
Sample A Female 37.5
Sample B Female 46.1
Sample C Male 34.9
Sample D Male 31.3
Ventral hippocampus
nTPM: 38.6
Samples: 4

Max nTPM: 48.3
Min nTPM: 29.2
Sample A Female 48.3
Sample B Female 32.9
Sample C Male 29.2
Sample D Male 44.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 35.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.4
Samples: 4

Max nTPM: 39.8
Min nTPM: 31.7
Sample A Male 31.9
Sample B Male 39.8
Sample C Female 34.2
Sample D Female 31.7
Hippocampal formation
nTPM: 35.8
Samples: 4

Max nTPM: 39.9
Min nTPM: 32.7
Sample A Male 39.9
Sample B Male 37.7
Sample C Female 32.8
Sample D Female 32.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70474863 Antisense, RP_050623_01_B12, Mouse strain C57BL/6J (56 days, male) 0.0

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