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ACSM3
HPA
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  • ACSM3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ACSM3
Synonyms SA, SAH
Gene descriptioni

Full gene name according to HGNC.

Acyl-CoA synthetase medium chain family member 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband p12.3
Chromosome location (bp) 20610243 - 20797581
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

9
Ensembl ENSG00000005187 (version 109)
Entrez gene 6296
HGNC HGNC:10522
UniProt Q53FZ2 (UniProt - Evidence at protein level)
neXtProt NX_Q53FZ2
GeneCards ACSM3
Antibodypedia ACSM3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalyzes the activation of fatty acids by CoA to produce an acyl-CoA, the first step in fatty acid metabolism 1. Capable of activating medium-chain fatty acids with a preference for isobutyrate among fatty acids with 2-6 carbon atoms (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ligase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Fatty acid metabolism, Lipid metabolism
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Magnesium, Metal-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables butyrate-CoA ligase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid biosynthetic process. Located in mitochondrion. Implicated in IgA glomerulonephritis. Biomarker of ulcerative colitis. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ACSM3-201
ENSP00000289416
ENST00000289416
Q53FZ2
[Direct mapping] Acyl-coenzyme A synthetase ACSM3, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004321 [fatty-acyl-CoA synthase activity]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006637 [acyl-CoA metabolic process]
GO:0008217 [regulation of blood pressure]
GO:0015645 [fatty acid ligase activity]
GO:0016874 [ligase activity]
GO:0018729 [propionate CoA-transferase activity]
GO:0031956 [medium-chain fatty acid-CoA ligase activity]
GO:0042632 [cholesterol homeostasis]
GO:0043759 [methylbutanoate-CoA ligase activity]
GO:0046872 [metal ion binding]
GO:0047760 [butyrate-CoA ligase activity]
GO:0050218 [propionate-CoA ligase activity]
Show all
586 aa
66.2 kDa
No 0
ACSM3-202
ENSP00000394565
ENST00000440284
Q53FZ2
[Direct mapping] Acyl-coenzyme A synthetase ACSM3, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004321 [fatty-acyl-CoA synthase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006637 [acyl-CoA metabolic process]
GO:0008217 [regulation of blood pressure]
GO:0015645 [fatty acid ligase activity]
GO:0016874 [ligase activity]
GO:0031956 [medium-chain fatty acid-CoA ligase activity]
GO:0042632 [cholesterol homeostasis]
GO:0043759 [methylbutanoate-CoA ligase activity]
GO:0046872 [metal ion binding]
GO:0047760 [butyrate-CoA ligase activity]
GO:0050218 [propionate-CoA ligase activity]
Show all
438 aa
49.5 kDa
No 0
ACSM3-205
ENSP00000456055
ENST00000561584
H3BR33
[Direct mapping] Acyl-coenzyme A synthetase ACSM3, mitochondrial
Show all
Metabolic proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
52 aa
6.2 kDa
No 0
ACSM3-206
ENSP00000458068
ENST00000561795
H3BVD5
[Direct mapping] Acyl-coenzyme A synthetase ACSM3, mitochondrial
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
158 aa
18.3 kDa
No 0
ACSM3-207
ENSP00000456767
ENST00000562251
H3BSM0
[Direct mapping] Acyl-coenzyme A synthetase ACSM3, mitochondrial
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006629 [lipid metabolic process]
Show all
582 aa
65.4 kDa
No 0
ACSM3-208
ENSP00000457926
ENST00000563914
H3BV29
[Direct mapping] Acyl-coenzyme A synthetase ACSM3, mitochondrial
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006629 [lipid metabolic process]
Show all
235 aa
26.2 kDa
No 0
ACSM3-209
ENSP00000457158
ENST00000564701
H3BTG0
[Direct mapping] Acyl-coenzyme A synthetase ACSM3, mitochondrial
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
25 aa
2.9 kDa
No 0
ACSM3-213
ENSP00000457003
ENST00000568235
H3BT38
[Direct mapping] Acyl-coenzyme A synthetase ACSM3, mitochondrial
Show all
Metabolic proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
100 aa
11.9 kDa
No 0
ACSM3-214
ENSP00000457608
ENST00000569141
H3BUF2
[Direct mapping] Acyl-coenzyme A synthetase ACSM3, mitochondrial
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
135 aa
15.1 kDa
No 0

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