We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SPPL2B
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SPPL2B
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:21.8 nTPM
HPA Brain:29.4 nTPM
GTEx:21.8 nTPM
Pig:7.4 nTPM
Mouse:7.5 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 24.8
1961 Female, age 42, unknown 28.1
2226 Male, age 75, left hemisphere 21.5
Dorsomedial nucleus
nTPM: 28.5
2017 Female, age 42, unknown 30.4
1989 Male, age 62, unknown 29.1
2041 Female, age 72, unknown 26.1
Lateral hypothalamic area
nTPM: 24.2
2412 Male, age 62, unknown 25.5
2228 Male, age 66, unknown 24.9
1791 Male, age 80, right hemisphere 24.3
2271 Male, age 75, both hemispheres 22.0
Mammillary body
nTPM: 29.4
2413 Male, age 66, unknown 30.5
1923 Female, age 72, unknown 30.4
1834 Female, age 42, unknown 29.9
1948 Female, age 72, unknown 28.3
1945 Male, age 80, right hemisphere 27.9
Paraventricular nucleus
nTPM: 23.3
2700 Male, age 62, unknown 23.3
Preoptic area
nTPM: 27.2
1907 Male, age 80, right hemisphere 28.1
2414 Female, age 72, unknown 27.5
1861 Female, age 42, unknown 26.0
Supraoptic nucleus
nTPM: 25.2
2043 Male, age 62, unknown 28.3
2835 Female, age 72, unknown 25.6
1894 Female, age 72, unknown 21.6
Ventromedial nucleus
nTPM: 23.8
1982 Female, age 72, unknown 24.1
1822 Female, age 42, unknown 23.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 21.8
Samples: 257

Max nTPM: 46.6
Min nTPM: 7.6
Std nTPM: 5.7
Median nTPM: 21.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 46.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 41.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 35.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 35.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 34.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 34.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 34.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 34.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 34.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 33.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 33.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 32.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 32.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 32.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 31.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 31.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 31.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 31.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 30.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 30.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 30.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 30.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 30.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 30.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 29.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 29.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 28.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 28.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 28.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 28.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 28.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 28.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 28.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 27.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 27.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 27.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 27.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 26.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 26.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 26.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 26.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 26.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 26.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 26.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 26.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 26.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 26.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 26.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 26.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 26.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 26.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 25.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 25.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 25.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 25.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 25.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 25.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 25.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 25.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 25.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 25.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 25.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 24.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 24.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 24.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 24.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 24.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 24.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 24.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 24.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 24.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 24.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 24.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 24.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 24.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 24.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 24.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 23.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 23.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 23.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 23.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 23.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 23.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 23.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 23.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 23.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 23.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 23.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 23.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 23.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 23.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 23.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 23.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 23.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 23.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 23.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 23.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 23.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 23.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 23.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 23.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 23.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 23.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 22.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 22.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 22.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 22.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 22.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 22.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 22.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 22.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 22.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 22.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 22.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 21.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 21.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 21.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 21.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 21.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 21.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 21.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 21.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 21.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 21.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 21.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 21.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 21.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 21.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 21.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 21.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 21.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 21.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 21.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 21.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 21.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 21.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 20.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 20.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 20.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 20.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 20.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 20.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 20.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 20.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 20.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 20.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 20.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 20.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 20.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 20.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 20.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 20.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 20.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 20.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 20.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 20.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 20.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 20.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 20.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 20.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 20.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 20.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 19.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 19.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 19.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 19.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 19.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 19.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 19.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 19.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 19.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 19.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 19.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 19.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 19.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 19.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 19.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 19.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 19.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 18.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 18.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 18.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 18.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 18.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 18.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 18.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 18.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 18.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 18.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 18.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 18.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 18.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 18.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 18.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 18.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 18.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 18.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 18.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 18.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 18.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 18.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 17.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 17.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 17.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 17.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 17.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 17.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 17.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 17.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 17.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 17.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 17.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 17.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 17.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 17.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 17.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 16.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 16.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 16.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 16.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 16.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 16.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 16.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 16.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 16.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 16.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 16.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 15.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 15.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 15.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 15.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 15.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 15.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 14.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 14.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 14.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 14.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 14.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 14.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 14.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 14.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 13.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 13.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 12.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 12.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 12.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 12.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 12.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 10.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 10.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 10.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 10.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 9.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 9.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 9.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 7.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 7.6
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 7.4
Samples: 4

Max nTPM: 8.2
Min nTPM: 5.9
Sample A Female 7.9
Sample B Female 8.2
Sample C Male 7.6
Sample D Male 5.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 7.5
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.9
Sample A Male 7.9
Sample B Male 7.2
Sample C Female 6.9
Sample D Female 8.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.4
69407487 Antisense, RP_050414_01_G05, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo