HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.1 nTPM
HPA Brain:10.7 nTPM
GTEx:11.1 nTPM
FANTOM5:12.1 Scaled Tags Per Million
Pig:14.3 nTPM
Mouse:13.4 nTPM
Allen mouse:24.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055999
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 10.7
Sample id Sample description nTPM
Hippocampus
nTPM: 10.7
1898 Male, age 80, left hemisphere 12.3
2148 Female, age 91, left hemisphere 11.4
1855 Male, age 76, left hemisphere 10.7
1911 Female, age 85, right hemisphere 10.5
2529 Female, age 94, left hemisphere 10.4
2621 Female, age 67, right hemisphere 8.9
Dentate gyrus
nTPM: 9.2
2010 Male, age 76, both hemispheres 11.8
2530 Female, age 94, left hemisphere 10.9
2528 Male, age 74, both hemispheres 10.4
2246 Female, age 85, both hemispheres 8.1
1927 Female, age 91, both hemispheres 7.4
2531 Female, age 67, both hemispheres 6.4
Entorhinal gyrus
nTPM: 7.5
2117 Female, age 91, right hemisphere 11.4
2686 Male, age 75, right hemisphere 7.9
2764 Male, age 80, right hemisphere 7.8
1938 Female, age 85, left hemisphere 6.4
1787 Male, age 76, left hemisphere 6.2
2613 Female, age 94, left hemisphere 5.3
Hippocampus, CA1
nTPM: 9.3
1873 Female, age 85, both hemispheres 12.5
2527 Male, age 74, both hemispheres 9.0
2749 Male, age 80, left hemisphere 8.8
2045 Male, age 76, both hemispheres 8.1
2082 Female, age 91, right hemisphere 8.0
Hippocampus, CA2
nTPM: 9.4
1940 Female, age 85, left hemisphere 10.7
2249 Male, age 74, both hemispheres 10.3
1892 Male, age 76, both hemispheres 9.9
1963 Male, age 80, left hemisphere 9.7
2113 Female, age 91, right hemisphere 8.1
2437 Female, age 94, left hemisphere 7.4
Hippocampus, CA3
nTPM: 9.8
1891 Female, age 85, both hemispheres 12.4
2436 Male, age 74, both hemispheres 11.5
1867 Male, age 76, both hemispheres 10.6
2620 Female, age 94, left hemisphere 8.7
2861 Female, age 67, both hemispheres 8.0
2137 Male, age 80, left hemisphere 7.5
Parahippocampal cortex
nTPM: 7.5
2692 Male, age 74, both hemispheres 10.4
2018 Male, age 76, both hemispheres 10.1
2532 Female, age 72, left hemisphere 7.9
1990 Female, age 91, right hemisphere 7.8
2245 Female, age 91, both hemispheres 7.8
2622 Female, age 67, right hemisphere 7.6
1933 Female, age 85, both hemispheres 7.1
2250 Female, age 67, right hemisphere 6.7
1850 Male, age 80, both hemispheres 5.0
2693 Female, age 94, both hemispheres 4.3
Perirhinal gyrus
nTPM: 6.3
1847 Female, age 91, left hemisphere 10.2
1794 Male, age 80, right hemisphere 5.9
2521 Female, age 94, right hemisphere 5.7
1841 Female, age 85, right hemisphere 5.4
2848 Male, age 76, right hemisphere 4.1
Subiculum
nTPM: 10.1
2042 Male, age 76, both hemispheres 13.4
2729 Female, age 91, right hemisphere 12.0
1901 Male, age 80, both hemispheres 10.6
2619 Male, age 74, both hemispheres 8.7
2438 Female, age 94, left hemisphere 8.0
1977 Female, age 85, both hemispheres 7.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.1
Samples: 197

Max nTPM: 72.0
Min nTPM: 3.5
Std nTPM: 5.6
Median nTPM: 10.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 72.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 25.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 21.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 19.1
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 19.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 19.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 18.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 17.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 17.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 17.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 17.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 12.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.1
FF:10153-102I9 76 years, female 15.9
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.3
Pig sample Sample description nTPM
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.0
Sample A Female 17.0
Sample B Female 12.0
Sample C Male 12.1
Sample D Male 15.9
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 17.2
Min nTPM: 9.0
Sample A Female 17.2
Sample B Female 9.0
Sample C Male 12.9
Sample D Male 9.1
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 16.8
Min nTPM: 6.1
Sample A Female 16.8
Sample B Female 12.5
Sample C Male 12.7
Sample D Male 6.1
Ventral hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 16.3
Min nTPM: 10.3
Sample A Female 15.0
Sample B Female 11.0
Sample C Male 16.3
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 13.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 11.7
Min nTPM: 9.0
Sample A Male 9.9
Sample B Male 9.0
Sample C Female 10.7
Sample D Female 11.7
Hippocampal formation
nTPM: 13.5
Samples: 4

Max nTPM: 14.6
Min nTPM: 13.0
Sample A Male 13.0
Sample B Male 13.0
Sample C Female 13.2
Sample D Female 14.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 24.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.4
199224 Antisense, RP_040604_02_F08, Mouse strain C57BL/6J (56 days, male) 24.4
275874 Antisense, RP_040604_02_F08, Mouse strain C57BL/6J (56 days, male) 9.1

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