HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.0 nTPM
HPA Brain:15.5 nTPM
GTEx:14.0 nTPM
FANTOM5:14.5 Scaled Tags Per Million
Pig:38.4 nTPM
Mouse:15.4 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034535Antibody HPA034536
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 15.5
Sample id Sample description nTPM
Hippocampus
nTPM: 13.8
1898 Male, age 80, left hemisphere 16.9
2621 Female, age 67, right hemisphere 14.8
2529 Female, age 94, left hemisphere 13.9
2148 Female, age 91, left hemisphere 13.2
1855 Male, age 76, left hemisphere 13.1
1911 Female, age 85, right hemisphere 10.9
Dentate gyrus
nTPM: 14.5
1927 Female, age 91, both hemispheres 16.8
2531 Female, age 67, both hemispheres 15.6
2010 Male, age 76, both hemispheres 14.6
2530 Female, age 94, left hemisphere 14.4
2528 Male, age 74, both hemispheres 13.5
2246 Female, age 85, both hemispheres 12.1
Entorhinal gyrus
nTPM: 12.9
2764 Male, age 80, right hemisphere 14.4
1787 Male, age 76, left hemisphere 14.3
1938 Female, age 85, left hemisphere 14.2
2613 Female, age 94, left hemisphere 12.5
2686 Male, age 75, right hemisphere 12.1
2117 Female, age 91, right hemisphere 10.2
Hippocampus, CA1
nTPM: 14.1
2749 Male, age 80, left hemisphere 18.6
1873 Female, age 85, both hemispheres 15.6
2082 Female, age 91, right hemisphere 14.3
2045 Male, age 76, both hemispheres 11.7
2527 Male, age 74, both hemispheres 10.4
Hippocampus, CA2
nTPM: 15.1
1963 Male, age 80, left hemisphere 18.7
1892 Male, age 76, both hemispheres 18.5
2437 Female, age 94, left hemisphere 17.0
1940 Female, age 85, left hemisphere 13.5
2113 Female, age 91, right hemisphere 11.7
2249 Male, age 74, both hemispheres 11.4
Hippocampus, CA3
nTPM: 13.8
2137 Male, age 80, left hemisphere 16.0
1867 Male, age 76, both hemispheres 14.9
2861 Female, age 67, both hemispheres 14.6
2436 Male, age 74, both hemispheres 13.9
1891 Female, age 85, both hemispheres 11.9
2620 Female, age 94, left hemisphere 11.3
Parahippocampal cortex
nTPM: 12.9
1850 Male, age 80, both hemispheres 17.2
1933 Female, age 85, both hemispheres 13.3
2532 Female, age 72, left hemisphere 13.0
2245 Female, age 91, both hemispheres 12.8
2693 Female, age 94, both hemispheres 12.8
2018 Male, age 76, both hemispheres 12.6
2250 Female, age 67, right hemisphere 12.5
2622 Female, age 67, right hemisphere 12.1
1990 Female, age 91, right hemisphere 11.7
2692 Male, age 74, both hemispheres 11.1
Perirhinal gyrus
nTPM: 15.5
1847 Female, age 91, left hemisphere 16.9
1841 Female, age 85, right hemisphere 16.8
2848 Male, age 76, right hemisphere 15.8
1794 Male, age 80, right hemisphere 15.7
2521 Female, age 94, right hemisphere 12.2
Subiculum
nTPM: 12.0
1977 Female, age 85, both hemispheres 13.4
2729 Female, age 91, right hemisphere 13.3
1901 Male, age 80, both hemispheres 11.9
2042 Male, age 76, both hemispheres 11.5
2438 Female, age 94, left hemisphere 11.2
2619 Male, age 74, both hemispheres 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 255

Max nTPM: 37.2
Min nTPM: 6.6
Std nTPM: 3.9
Median nTPM: 13.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 37.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 34.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 24.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 23.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 22.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 22.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 22.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 21.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 21.1
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 20.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.5
FF:10153-102I9 76 years, female 18.6
FF:10169-103B7 60 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 38.4
Pig sample Sample description nTPM
Subiculum
nTPM: 38.4
Samples: 4

Max nTPM: 48.6
Min nTPM: 31.9
Sample A Female 48.6
Sample B Female 36.5
Sample C Male 31.9
Sample D Male 36.6
Dorsal hippocampus
nTPM: 29.2
Samples: 4

Max nTPM: 32.9
Min nTPM: 26.4
Sample A Female 32.9
Sample B Female 27.2
Sample C Male 30.1
Sample D Male 26.4
Entorhinal cortex
nTPM: 33.7
Samples: 4

Max nTPM: 36.4
Min nTPM: 30.7
Sample A Female 34.3
Sample B Female 36.4
Sample C Male 33.3
Sample D Male 30.7
Ventral hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 37.5
Min nTPM: 24.9
Sample A Female 31.7
Sample B Female 25.2
Sample C Male 37.5
Sample D Male 24.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 15.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 16.4
Min nTPM: 14.0
Sample A Male 16.4
Sample B Male 15.8
Sample C Female 15.3
Sample D Female 14.0
Hippocampal formation
nTPM: 14.9
Samples: 4

Max nTPM: 16.5
Min nTPM: 13.0
Sample A Male 16.5
Sample B Male 13.0
Sample C Female 15.2
Sample D Female 14.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
75990555 Antisense, RP_060608_01_D07, Mouse strain C57BL/6J (56 days, male) 0.5

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