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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

142.791
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:135.0 nTPM
HPA Brain:521.4 nTPM
GTEx:135.0 nTPM
Pig:90.3 nTPM
Mouse:123.4 nTPM
Allen mouse:9.0 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA015979
Hypothalamus mean intensity 142.791
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 23.294
Periventricular hypothalamic nucleus 138.496
Supraoptic nucleus 57.572
Tuberal nucleus 108.526
Ventral tuberomammillary nucleus 104.320
Lateral preoptic area 14.359
Medial preoptic area 19.868
Suprachiasmatic nucleus 92.222
Paraventricular hypothalamic nucleus 53.478
Anterior hypothalamic area, central 31.574
Ventral medial hypothalamic nucleus 22.474
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 137.667
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 52.629
Dorsal medial hypothalamic nucleus 25.621
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

521.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 385.9
1961 Female, age 42, unknown 562.0
2226 Male, age 75, left hemisphere 209.7
Dorsomedial nucleus
nTPM: 234.9
2017 Female, age 42, unknown 373.2
2041 Female, age 72, unknown 261.8
1989 Male, age 62, unknown 69.5
Lateral hypothalamic area
nTPM: 184.5
2412 Male, age 62, unknown 347.9
2228 Male, age 66, unknown 167.0
1791 Male, age 80, right hemisphere 156.2
2271 Male, age 75, both hemispheres 66.8
Mammillary body
nTPM: 40.6
1945 Male, age 80, right hemisphere 50.8
1948 Female, age 72, unknown 47.7
1834 Female, age 42, unknown 40.0
2413 Male, age 66, unknown 39.7
1923 Female, age 72, unknown 24.9
Paraventricular nucleus
nTPM: 521.4
2700 Male, age 62, unknown 521.4
Preoptic area
nTPM: 198.5
1907 Male, age 80, right hemisphere 258.9
1861 Female, age 42, unknown 229.6
2414 Female, age 72, unknown 106.9
Supraoptic nucleus
nTPM: 142.9
2043 Male, age 62, unknown 219.9
1894 Female, age 72, unknown 118.0
2835 Female, age 72, unknown 90.7
Ventromedial nucleus
nTPM: 396.6
1822 Female, age 42, unknown 485.2
1982 Female, age 72, unknown 308.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 135.0
Samples: 202

Max nTPM: 314.7
Min nTPM: 0.2
Std nTPM: 73.5
Median nTPM: 142.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 314.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 314.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 307.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 298.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 285.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 276.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 272.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 263.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 262.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 255.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 251.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 251.3
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 246.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 243.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 240.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 237.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 235.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 234.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 234.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 233.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 232.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 232.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 230.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 228.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 226.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 223.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 222.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 217.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 217.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 216.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 215.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 213.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 208.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 208.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 207.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 206.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 204.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 204.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 197.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 196.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 196.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 194.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 194.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 194.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 193.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 190.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 190.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 187.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 187.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 187.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 186.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 186.0
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 184.4
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 184.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 183.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 182.8
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 182.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 181.2
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 179.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 177.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 177.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 175.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 175.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 173.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 173.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 173.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 172.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 170.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 169.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 168.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 167.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 165.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 163.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 162.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 161.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 161.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 160.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 159.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 158.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 158.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 158.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 157.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 154.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 153.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 151.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 151.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 151.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 150.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 150.1
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 149.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 149.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 149.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 148.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 147.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 147.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 146.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 146.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 146.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 146.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 143.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 143.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 140.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 140.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 139.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 138.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 138.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 138.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 137.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 136.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 135.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 133.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 132.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 132.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 131.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 130.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 128.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 126.2
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 123.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 123.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 121.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 120.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 118.8
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 115.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 113.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 112.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 105.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 105.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 103.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 102.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 98.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 93.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 92.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 90.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 90.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 89.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 88.9
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 86.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 86.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 86.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 85.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 84.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 84.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 81.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 81.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 80.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 80.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 79.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 77.8
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 77.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 77.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 76.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 74.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 72.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 71.2
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 71.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 70.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 69.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 67.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 66.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 65.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 64.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 60.9
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 60.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 57.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 57.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 53.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 52.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 52.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 49.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 46.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 46.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 46.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 45.6
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 43.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 43.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 42.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 42.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 40.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 39.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 38.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 38.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 35.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 34.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 32.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 31.0
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 30.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 27.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 25.8
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 23.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 21.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 21.6
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 19.8
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 17.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 17.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 16.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 15.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 14.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 11.6
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 9.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 9.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 6.1
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 0.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 90.3
Samples: 4

Max nTPM: 136.1
Min nTPM: 69.8
Sample A Female 136.1
Sample B Female 69.8
Sample C Male 77.3
Sample D Male 78.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 123.4
Samples: 4

Max nTPM: 142.1
Min nTPM: 108.8
Sample A Male 142.1
Sample B Male 132.7
Sample C Female 108.8
Sample D Female 110.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.0
74735337 Antisense, RP_060302_01_E02, Mouse strain C57BL/6J (56 days, male) 12.5
70795349 Antisense, RP_050712_01_D04, Mouse strain C57BL/6J (56 days, male) 11.8
75081206 Antisense, RP_060315_03_C11, Mouse strain C57BL/6J (56 days, male) 9.6
71924504 Antisense, RP_050630_03_D11, Mouse strain C57BL/6J (56 days, male) 9.2
72338724 Antisense, RP_051101_01_C06, Mouse strain C57BL/6J (56 days, male) 8.4
70722898 Antisense, RP_050630_03_D11, Mouse strain C57BL/6J (56 days, male) 6.6
70298477 Antisense, RP_050602_02_H03, Mouse strain C57BL/6J (56 days, male) 2.2

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