HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:14.1 nTPM
HPA Brain:43.7 nTPM
GTEx:14.1 nTPM
FANTOM5:19.4 Scaled Tags Per Million
Pig:10.7 nTPM
Mouse:84.3 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039105Antibody HPA039828
Glial cells Not detectedNot detected
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 43.7
Sample id Sample description nTPM
Hippocampus
nTPM: 34.8
1855 Male, age 76, left hemisphere 36.6
2148 Female, age 91, left hemisphere 36.6
2621 Female, age 67, right hemisphere 34.4
2529 Female, age 94, left hemisphere 34.2
1911 Female, age 85, right hemisphere 33.7
1898 Male, age 80, left hemisphere 33.5
Dentate gyrus
nTPM: 36.3
2010 Male, age 76, both hemispheres 40.2
1927 Female, age 91, both hemispheres 39.1
2530 Female, age 94, left hemisphere 37.7
2528 Male, age 74, both hemispheres 34.8
2531 Female, age 67, both hemispheres 34.7
2246 Female, age 85, both hemispheres 31.1
Entorhinal gyrus
nTPM: 43.7
2613 Female, age 94, left hemisphere 50.5
2764 Male, age 80, right hemisphere 45.6
2686 Male, age 75, right hemisphere 43.3
1787 Male, age 76, left hemisphere 43.2
1938 Female, age 85, left hemisphere 42.9
2117 Female, age 91, right hemisphere 37.0
Hippocampus, CA1
nTPM: 37.2
2749 Male, age 80, left hemisphere 42.6
2082 Female, age 91, right hemisphere 39.0
2045 Male, age 76, both hemispheres 37.2
1873 Female, age 85, both hemispheres 34.6
2527 Male, age 74, both hemispheres 32.5
Hippocampus, CA2
nTPM: 36.9
1940 Female, age 85, left hemisphere 39.7
2437 Female, age 94, left hemisphere 39.1
2249 Male, age 74, both hemispheres 36.5
1963 Male, age 80, left hemisphere 35.8
2113 Female, age 91, right hemisphere 35.6
1892 Male, age 76, both hemispheres 34.9
Hippocampus, CA3
nTPM: 37.3
2620 Female, age 94, left hemisphere 45.1
2861 Female, age 67, both hemispheres 39.9
2137 Male, age 80, left hemisphere 38.7
2436 Male, age 74, both hemispheres 36.7
1867 Male, age 76, both hemispheres 35.2
1891 Female, age 85, both hemispheres 28.2
Parahippocampal cortex
nTPM: 38.8
2622 Female, age 67, right hemisphere 45.8
1933 Female, age 85, both hemispheres 42.2
1990 Female, age 91, right hemisphere 42.2
2245 Female, age 91, both hemispheres 40.8
2693 Female, age 94, both hemispheres 38.8
2532 Female, age 72, left hemisphere 37.5
2018 Male, age 76, both hemispheres 35.8
2692 Male, age 74, both hemispheres 35.5
1850 Male, age 80, both hemispheres 35.3
2250 Female, age 67, right hemisphere 33.9
Perirhinal gyrus
nTPM: 38.6
1847 Female, age 91, left hemisphere 42.8
1794 Male, age 80, right hemisphere 39.8
2521 Female, age 94, right hemisphere 39.0
2848 Male, age 76, right hemisphere 36.0
1841 Female, age 85, right hemisphere 35.3
Subiculum
nTPM: 32.4
2729 Female, age 91, right hemisphere 37.2
2619 Male, age 74, both hemispheres 35.1
1977 Female, age 85, both hemispheres 33.7
2042 Male, age 76, both hemispheres 32.4
1901 Male, age 80, both hemispheres 31.3
2438 Female, age 94, left hemisphere 24.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.1
Samples: 197

Max nTPM: 24.9
Min nTPM: 3.8
Std nTPM: 3.9
Median nTPM: 14.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 24.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 22.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 22.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 22.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 21.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 21.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 20.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 20.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 19.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.4
FF:10153-102I9 76 years, female 22.2
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10.7
Pig sample Sample description nTPM
Subiculum
nTPM: 9.9
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.7
Sample A Female 11.5
Sample B Female 8.7
Sample C Male 10.2
Sample D Male 9.1
Dorsal hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.2
Sample A Female 11.1
Sample B Female 9.2
Sample C Male 10.4
Sample D Male 8.2
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.7
Sample A Female 9.2
Sample B Female 8.7
Sample C Male 11.4
Sample D Male 10.8
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 13.9
Min nTPM: 7.4
Sample A Female 11.0
Sample B Female 7.4
Sample C Male 13.9
Sample D Male 10.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 84.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.4
Samples: 4

Max nTPM: 76.3
Min nTPM: 67.1
Sample A Male 71.9
Sample B Male 67.1
Sample C Female 74.1
Sample D Female 76.3
Hippocampal formation
nTPM: 84.3
Samples: 4

Max nTPM: 94.2
Min nTPM: 73.5
Sample A Male 80.2
Sample B Male 73.5
Sample C Female 94.2
Sample D Female 89.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
356489 Antisense, RP_040617_02_F04, Mouse strain C57BL/6J (56 days, male) 6.4
294046 Antisense, RP_040617_02_F04, Mouse strain C57BL/6J (56 days, male) 5.0
70919053 Antisense, RP_050712_04_A10, Mouse strain C57BL/6J (56 days, male) 0.1

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