We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CALCOCO1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CALCOCO1
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:103.2 nTPM
HPA:54.5 nTPM
GTEx:103.2 nTPM
FANTOM5:35.1 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA038313Antibody HPA038314
Ovarian stroma cells Not detectedNot detected



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.5
overview
Female, age 64
Ovary sample 192
nTPM: 42.8
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 48.2
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 60.3
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 57.7
N/A
Female, age 16
Ovary sample 3663
nTPM: 45.2
N/A
Female, age 20
Ovary sample 3664
nTPM: 53.6
N/A
Female, age 32
Ovary sample 3665
nTPM: 73.5

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.2
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 103.2
Samples: 193

Max nTPM: 195.4
Min nTPM: 27.9
Std nTPM: 30.9
Median nTPM: 102.8
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 195.4
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 186.0
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 179.3
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 175.9
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 168.6
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 163.0
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 158.8
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 158.0
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 157.9
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 156.5
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 155.4
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 154.6
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 152.6
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 152.4
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 151.4
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 150.2
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 148.6
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 147.7
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 145.8
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 144.1
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 143.5
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 142.3
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 142.3
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 141.8
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 139.4
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 138.7
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 137.6
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 137.3
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 136.5
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 136.0
GTEX-183WM-1926-SM-72D5F 70-79 years, female 135.7
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 135.0
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 134.2
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 132.8
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 131.7
GTEX-R45C-2526-SM-GRR28 60-69 years, female 129.6
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 128.0
GTEX-18D9A-0826-SM-718C1 30-39 years, female 128.0
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 126.8
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 126.4
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 124.4
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 123.6
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 123.0
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 122.0
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 121.5
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 119.8
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 118.8
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 118.6
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 118.2
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 118.2
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 118.0
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 118.0
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 117.7
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 117.6
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 117.3
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 117.2
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 116.6
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 116.5
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 116.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 116.2
GTEX-RU72-2226-SM-46MUE 50-59 years, female 115.2
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 115.1
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 115.0
GTEX-S32W-1226-SM-4AD67 50-59 years, female 115.0
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 114.4
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 113.8
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 113.5
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 113.5
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 113.3
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 112.4
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 112.1
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 111.4
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 111.1
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 111.0
GTEX-Q734-0726-SM-48TZP 40-49 years, female 110.2
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 110.0
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 109.8
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 109.8
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 109.5
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 109.3
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 109.3
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 109.1
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 108.1
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 107.6
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 107.4
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 107.2
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 106.0
GTEX-15EOM-1526-SM-68723 20-29 years, female 105.4
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 105.4
GTEX-P78B-1926-SM-3P616 40-49 years, female 105.3
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 104.9
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 104.8
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 104.7
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 103.8
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 103.6
GTEX-14PKV-1226-SM-6871T 20-29 years, female 103.1
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 102.8
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 102.8
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 102.7
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 102.6
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 102.5
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 102.4
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 102.4
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 101.2
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 101.2
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 101.1
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 100.4
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 100.3
GTEX-14BIN-1426-SM-664NI 50-59 years, female 99.3
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 98.7
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 97.9
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 97.7
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 97.6
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 97.5
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 97.2
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 96.1
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 95.2
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 95.2
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 94.8
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 94.7
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 94.2
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 94.0
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 92.2
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 92.0
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 91.9
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 91.6
GTEX-QVJO-3126-SM-COH22 60-69 years, female 91.4
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 89.9
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 89.8
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 89.1
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 88.9
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 88.2
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 87.8
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 87.7
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 87.4
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 87.3
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 87.2
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 86.8
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 85.9
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 85.6
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 85.4
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 84.9
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 84.5
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 84.1
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 83.7
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 83.5
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 83.4
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 81.3
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 81.0
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 80.9
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 79.8
GTEX-145ME-1226-SM-5MR87 40-49 years, female 79.5
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 79.0
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 77.9
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 77.8
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 77.4
GTEX-R55G-1526-SM-48FER 40-49 years, female 77.0
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 76.8
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 76.0
GTEX-S341-0726-SM-4AD5R 40-49 years, female 75.9
GTEX-11I78-1926-SM-59878 50-59 years, female 75.0
GTEX-13SLX-2426-SM-664OM 50-59 years, female 74.9
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 73.3
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 72.6
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 71.2
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 70.9
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 69.8
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 69.4
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 69.3
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 69.2
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 69.0
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 67.5
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 66.2
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 64.7
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 64.0
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 59.4
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 59.2
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 58.2
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 57.9
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 55.6
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 53.9
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 51.8
GTEX-QCQG-1426-SM-48U22 50-59 years, female 51.8
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 51.3
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 50.0
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 48.0
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 45.2
GTEX-14JG6-0626-SM-68716 30-39 years, female 40.2
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 40.1
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 39.3
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 38.9
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 37.3
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 27.9
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

35.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 35.1
FF:10020-101D2 47,75,84 years, female 35.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo