HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:281.7 nTPM
HPA Brain:301.2 nTPM
GTEx:281.7 nTPM
FANTOM5:330.1 Scaled Tags Per Million
Pig:198.1 nTPM
Mouse:1067.8 nTPM
Allen mouse:22.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027296Antibody HPA054276Antibody CAB047333
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumLowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 301.2
Sample id Sample description nTPM
Hippocampus
nTPM: 207.9
1898 Male, age 80, left hemisphere 335.2
2621 Female, age 67, right hemisphere 214.2
1855 Male, age 76, left hemisphere 190.4
2148 Female, age 91, left hemisphere 174.5
1911 Female, age 85, right hemisphere 167.0
2529 Female, age 94, left hemisphere 166.3
Dentate gyrus
nTPM: 220.0
1927 Female, age 91, both hemispheres 344.3
2010 Male, age 76, both hemispheres 243.8
2528 Male, age 74, both hemispheres 212.3
2246 Female, age 85, both hemispheres 179.2
2530 Female, age 94, left hemisphere 172.1
2531 Female, age 67, both hemispheres 168.2
Entorhinal gyrus
nTPM: 196.2
2764 Male, age 80, right hemisphere 262.8
1938 Female, age 85, left hemisphere 226.9
1787 Male, age 76, left hemisphere 196.8
2613 Female, age 94, left hemisphere 196.4
2686 Male, age 75, right hemisphere 155.2
2117 Female, age 91, right hemisphere 139.4
Hippocampus, CA1
nTPM: 264.9
2749 Male, age 80, left hemisphere 462.6
1873 Female, age 85, both hemispheres 238.3
2527 Male, age 74, both hemispheres 235.8
2045 Male, age 76, both hemispheres 194.8
2082 Female, age 91, right hemisphere 193.1
Hippocampus, CA2
nTPM: 244.0
1892 Male, age 76, both hemispheres 327.5
1963 Male, age 80, left hemisphere 296.7
2249 Male, age 74, both hemispheres 268.6
1940 Female, age 85, left hemisphere 203.5
2437 Female, age 94, left hemisphere 188.1
2113 Female, age 91, right hemisphere 179.5
Hippocampus, CA3
nTPM: 240.2
2436 Male, age 74, both hemispheres 331.5
2137 Male, age 80, left hemisphere 311.2
1867 Male, age 76, both hemispheres 258.8
2620 Female, age 94, left hemisphere 201.9
1891 Female, age 85, both hemispheres 190.6
2861 Female, age 67, both hemispheres 147.3
Parahippocampal cortex
nTPM: 223.1
1850 Male, age 80, both hemispheres 310.6
1990 Female, age 91, right hemisphere 278.4
1933 Female, age 85, both hemispheres 244.1
2250 Female, age 67, right hemisphere 243.5
2245 Female, age 91, both hemispheres 238.1
2693 Female, age 94, both hemispheres 211.8
2018 Male, age 76, both hemispheres 194.7
2532 Female, age 72, left hemisphere 191.0
2622 Female, age 67, right hemisphere 161.3
2692 Male, age 74, both hemispheres 157.0
Perirhinal gyrus
nTPM: 301.2
1847 Female, age 91, left hemisphere 417.6
1841 Female, age 85, right hemisphere 311.7
1794 Male, age 80, right hemisphere 310.5
2521 Female, age 94, right hemisphere 262.7
2848 Male, age 76, right hemisphere 203.3
Subiculum
nTPM: 184.1
1901 Male, age 80, both hemispheres 245.4
1977 Female, age 85, both hemispheres 229.2
2619 Male, age 74, both hemispheres 166.9
2438 Female, age 94, left hemisphere 156.8
2729 Female, age 91, right hemisphere 155.4
2042 Male, age 76, both hemispheres 150.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 281.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 281.7
Samples: 255

Max nTPM: 816.9
Min nTPM: 74.1
Std nTPM: 156.3
Median nTPM: 252.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 816.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 806.3
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 695.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 686.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 670.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 635.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 629.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 604.5
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 599.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 598.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 595.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 330.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 330.1
FF:10169-103B7 60 years, female 517.2
FF:10153-102I9 76 years, female 143.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 198.1
Pig sample Sample description nTPM
Subiculum
nTPM: 175.1
Samples: 4

Max nTPM: 215.7
Min nTPM: 155.5
Sample A Female 215.7
Sample B Female 155.5
Sample C Male 170.7
Sample D Male 158.5
Dorsal hippocampus
nTPM: 179.3
Samples: 4

Max nTPM: 213.4
Min nTPM: 123.4
Sample A Female 206.0
Sample B Female 174.5
Sample C Male 213.4
Sample D Male 123.4
Entorhinal cortex
nTPM: 198.2
Samples: 4

Max nTPM: 245.4
Min nTPM: 165.5
Sample A Female 200.2
Sample B Female 245.4
Sample C Male 181.5
Sample D Male 165.5
Ventral hippocampus
nTPM: 178.1
Samples: 4

Max nTPM: 241.3
Min nTPM: 124.5
Sample A Female 241.3
Sample B Female 124.5
Sample C Male 192.5
Sample D Male 154.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1067.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1067.8
Samples: 4

Max nTPM: 1112.1
Min nTPM: 988.8
Sample A Male 988.8
Sample B Male 1102.3
Sample C Female 1068.0
Sample D Female 1112.1
Hippocampal formation
nTPM: 958.5
Samples: 4

Max nTPM: 1107.2
Min nTPM: 888.2
Sample A Male 1107.2
Sample B Male 888.2
Sample C Female 903.5
Sample D Female 935.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 22.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.2
69752155 Antisense, RP_050505_01_C05, Mouse strain C57BL/6J (56 days, male) 22.2

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