COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
RNA expressioni
Consensus:26.0 nTPM
HPA:26.0 nTPM
GTEx:25.8 nTPM
FANTOM5:34.2 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA010588
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Not detected


COLON - HPA RNA-seqi
Average nTPMi 26.0
overview
Male, age 54
Colon sample 67
nTPM: 25.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 21
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 19.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 16.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 23
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 28.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 27
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 32.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 26.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 32.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 28.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 27.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 28.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 25.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 25.8
Samples: 419

Max nTPM: 42.7
Min nTPM: 14.9
Std nTPM: 4.9
Median nTPM: 24.9
GTEX-15D79-2826-SM-GPRXP 50-59 years, male 42.7
GTEX-1M4P7-2226-SM-GPI9V 60-69 years, male 41.8
GTEX-183WM-2526-SM-731BP 70-79 years, female 41.2
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 39.2
GTEX-15SHU-2626-SM-GPI9H 40-49 years, female 39.1
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 38.7
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 37.7
GTEX-18465-2726-SM-7LT9I 50-59 years, male 37.1
GTEX-1HBPI-2226-SM-9WYTY 50-59 years, male 37.1
GTEX-113JC-1726-SM-GIN9H 50-59 years, female 36.6
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 36.6
Show allShow less
Colon - Transverse
Average nTPM: 24.3
Samples: 479

Max nTPM: 53.8
Min nTPM: 10.7
Std nTPM: 5.7
Median nTPM: 22.8
GTEX-132QS-1726-SM-GHWP6 60-69 years, male 53.8
GTEX-15DYW-2326-SM-6PAMU 60-69 years, female 46.7
GTEX-WOFL-2626-SM-F21IV 60-69 years, male 43.5
GTEX-131YS-2726-SM-GINA1 60-69 years, female 42.5
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 42.5
GTEX-1RQEC-2726-SM-GOR1P 60-69 years, male 41.4
GTEX-1E2YA-2626-SM-7MGWW 50-59 years, male 40.9
GTEX-1AX9I-2626-SM-73KU5 60-69 years, male 40.2
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 39.9
GTEX-U412-1726-SM-EZ6KX 60-69 years, male 39.8
GTEX-144GL-2526-SM-5TDDL 50-59 years, male 39.5
Show allShow less

COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 34.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 34.2
FF:10014-101C5 62,83,84 years, mixed 34.2

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo