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CCDC28A
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  • TISSUE

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  • CCDC28A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:46.8 nTPM
HPA Brain:31.3 nTPM
GTEx:46.8 nTPM
Pig:11.8 nTPM
Mouse:32.3 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 31.3
2226 Male, age 75, left hemisphere 34.6
1961 Female, age 42, unknown 28.0
Dorsomedial nucleus
nTPM: 22.9
2041 Female, age 72, unknown 30.9
2017 Female, age 42, unknown 19.7
1989 Male, age 62, unknown 18.1
Lateral hypothalamic area
nTPM: 27.5
1791 Male, age 80, right hemisphere 31.4
2228 Male, age 66, unknown 29.2
2271 Male, age 75, both hemispheres 24.9
2412 Male, age 62, unknown 24.5
Mammillary body
nTPM: 23.9
1923 Female, age 72, unknown 31.6
1948 Female, age 72, unknown 24.9
2413 Male, age 66, unknown 23.4
1834 Female, age 42, unknown 20.9
1945 Male, age 80, right hemisphere 19.0
Paraventricular nucleus
nTPM: 26.1
2700 Male, age 62, unknown 26.1
Preoptic area
nTPM: 23.2
1907 Male, age 80, right hemisphere 25.6
1861 Female, age 42, unknown 22.1
2414 Female, age 72, unknown 21.7
Supraoptic nucleus
nTPM: 28.5
1894 Female, age 72, unknown 31.6
2043 Male, age 62, unknown 28.0
2835 Female, age 72, unknown 25.9
Ventromedial nucleus
nTPM: 26.6
1982 Female, age 72, unknown 27.2
1822 Female, age 42, unknown 25.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 46.8
Samples: 257

Max nTPM: 91.1
Min nTPM: 13.3
Std nTPM: 13.7
Median nTPM: 46.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 91.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 82.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 81.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 75.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 74.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 73.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 72.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 71.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 69.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 69.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 69.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 69.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 68.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 68.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 68.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 68.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 67.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 67.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 67.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 67.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 66.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 66.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 66.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 65.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 65.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 64.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 64.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 63.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 62.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 62.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 62.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 62.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 62.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 62.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 61.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 61.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 61.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 61.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 60.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 60.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 60.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 60.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 60.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 60.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 59.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 59.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 59.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 59.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 59.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 59.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 59.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 59.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 59.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 59.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 59.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 58.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 58.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 58.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 58.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 58.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 58.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 58.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 57.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 57.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 57.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 57.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 57.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 56.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 56.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 56.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 56.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 56.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 56.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 56.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 56.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 56.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 55.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 55.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 55.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 55.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 55.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 54.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 53.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 53.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 53.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 53.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 53.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 52.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 52.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 52.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 52.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 51.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 51.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 51.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 51.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 51.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 51.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 51.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 51.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 50.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 50.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 50.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 50.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 50.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 50.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 50.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 50.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 50.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 49.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 49.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 49.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 49.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 49.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 49.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 48.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 48.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 48.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 48.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 48.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 48.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 48.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 47.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 47.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 47.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 47.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 46.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 46.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 46.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 46.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 46.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 46.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 46.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 46.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 45.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 45.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 45.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 45.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 44.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 44.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 44.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 44.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 43.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 43.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 43.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 43.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 43.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 43.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 43.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 43.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 43.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 43.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 42.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 42.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 42.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 42.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 42.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 42.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 42.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 42.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 42.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 42.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 41.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 41.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 41.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 41.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 41.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 41.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 40.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 40.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 40.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 40.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 40.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 40.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 40.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 39.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 39.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 39.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 39.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 39.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 39.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 39.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 38.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 38.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 38.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 38.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 37.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 37.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 37.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 37.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 37.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 37.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 37.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 37.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 37.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 36.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 36.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 36.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 36.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 36.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 36.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 35.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 35.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 35.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 35.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 35.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 35.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 34.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 34.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 34.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 34.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 34.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 34.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 33.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 33.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 33.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 33.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 33.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 32.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 32.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 32.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 31.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 30.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 30.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 30.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 30.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 29.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 29.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 29.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 29.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 29.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 28.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 27.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 27.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 27.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 26.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 26.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 26.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 26.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 26.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 26.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 25.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 24.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 24.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 24.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 24.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 23.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 23.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 23.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 23.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 23.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 22.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 21.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 19.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 18.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 18.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 14.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 13.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 11.9
Samples: 4

Max nTPM: 13.5
Min nTPM: 10.9
Sample A Female 13.5
Sample B Female 11.4
Sample C Male 10.9
Sample D Male 11.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 32.3
Samples: 4

Max nTPM: 34.6
Min nTPM: 30.1
Sample A Male 30.1
Sample B Male 31.2
Sample C Female 34.6
Sample D Female 33.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.4
68158074 Antisense, RP_041116_02_G03, Mouse strain C57BL/6J (56 days, male) 0.4

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