HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:8.8 nTPM
HPA Brain:35.6 nTPM
GTEx:8.8 nTPM
FANTOM5:33.9 Scaled Tags Per Million
Pig:23.8 nTPM
Mouse:14.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA025959
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 35.6
Sample id Sample description nTPM
Hippocampus
nTPM: 30.3
2621 Female, age 67, right hemisphere 37.6
2529 Female, age 94, left hemisphere 31.9
1911 Female, age 85, right hemisphere 31.1
1898 Male, age 80, left hemisphere 29.8
1855 Male, age 76, left hemisphere 26.6
2148 Female, age 91, left hemisphere 25.0
Dentate gyrus
nTPM: 28.5
2530 Female, age 94, left hemisphere 33.8
2531 Female, age 67, both hemispheres 31.0
2246 Female, age 85, both hemispheres 30.0
1927 Female, age 91, both hemispheres 27.1
2528 Male, age 74, both hemispheres 25.8
2010 Male, age 76, both hemispheres 23.3
Entorhinal gyrus
nTPM: 35.6
2764 Male, age 80, right hemisphere 40.4
2613 Female, age 94, left hemisphere 36.6
1787 Male, age 76, left hemisphere 36.5
1938 Female, age 85, left hemisphere 34.5
2117 Female, age 91, right hemisphere 34.0
2686 Male, age 75, right hemisphere 31.5
Hippocampus, CA1
nTPM: 28.5
2749 Male, age 80, left hemisphere 37.0
2082 Female, age 91, right hemisphere 31.6
2527 Male, age 74, both hemispheres 30.1
1873 Female, age 85, both hemispheres 27.0
2045 Male, age 76, both hemispheres 17.0
Hippocampus, CA2
nTPM: 33.3
1892 Male, age 76, both hemispheres 37.8
1940 Female, age 85, left hemisphere 34.2
2113 Female, age 91, right hemisphere 34.1
2437 Female, age 94, left hemisphere 33.0
1963 Male, age 80, left hemisphere 32.2
2249 Male, age 74, both hemispheres 28.6
Hippocampus, CA3
nTPM: 31.1
2137 Male, age 80, left hemisphere 38.4
2861 Female, age 67, both hemispheres 34.5
1891 Female, age 85, both hemispheres 31.3
1867 Male, age 76, both hemispheres 29.9
2436 Male, age 74, both hemispheres 26.4
2620 Female, age 94, left hemisphere 26.3
Parahippocampal cortex
nTPM: 33.4
2532 Female, age 72, left hemisphere 40.1
2245 Female, age 91, both hemispheres 38.1
2622 Female, age 67, right hemisphere 35.7
1990 Female, age 91, right hemisphere 33.7
1850 Male, age 80, both hemispheres 32.6
2250 Female, age 67, right hemisphere 32.1
1933 Female, age 85, both hemispheres 31.6
2692 Male, age 74, both hemispheres 31.6
2693 Female, age 94, both hemispheres 31.4
2018 Male, age 76, both hemispheres 27.5
Perirhinal gyrus
nTPM: 34.2
1794 Male, age 80, right hemisphere 40.7
1841 Female, age 85, right hemisphere 35.7
1847 Female, age 91, left hemisphere 32.0
2848 Male, age 76, right hemisphere 31.5
2521 Female, age 94, right hemisphere 30.9
Subiculum
nTPM: 32.7
1977 Female, age 85, both hemispheres 37.9
2042 Male, age 76, both hemispheres 34.9
1901 Male, age 80, both hemispheres 34.6
2438 Female, age 94, left hemisphere 33.8
2619 Male, age 74, both hemispheres 32.4
2729 Female, age 91, right hemisphere 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 8.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.8
Samples: 255

Max nTPM: 37.4
Min nTPM: 3.6
Std nTPM: 3.3
Median nTPM: 8.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 37.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 22.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 18.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 17.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 16.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 16.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 16.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 15.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 15.4
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 15.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 33.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.9
FF:10153-102I9 76 years, female 41.9
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 23.8
Pig sample Sample description nTPM
Subiculum
nTPM: 21.1
Samples: 4

Max nTPM: 25.0
Min nTPM: 16.6
Sample A Female 25.0
Sample B Female 19.5
Sample C Male 23.3
Sample D Male 16.6
Dorsal hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 23.3
Min nTPM: 13.3
Sample A Female 21.6
Sample B Female 21.4
Sample C Male 23.3
Sample D Male 13.3
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 24.3
Min nTPM: 23.0
Sample A Female 23.9
Sample B Female 23.0
Sample C Male 23.9
Sample D Male 24.3
Ventral hippocampus
nTPM: 23.7
Samples: 4

Max nTPM: 30.5
Min nTPM: 18.4
Sample A Female 19.9
Sample B Female 18.4
Sample C Male 30.5
Sample D Male 25.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 15.6
Min nTPM: 12.1
Sample A Male 15.6
Sample B Male 15.2
Sample C Female 12.1
Sample D Female 15.5
Hippocampal formation
nTPM: 12.9
Samples: 4

Max nTPM: 14.4
Min nTPM: 11.4
Sample A Male 11.4
Sample B Male 14.3
Sample C Female 14.4
Sample D Female 11.6

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