HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.4 nTPM
HPA Brain:39.8 nTPM
GTEx:14.4 nTPM
FANTOM5:50.4 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:13.5 nTPM
Allen mouse:7.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051621
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 39.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.9
1898 Male, age 80, left hemisphere 40.6
1855 Male, age 76, left hemisphere 37.6
2148 Female, age 91, left hemisphere 37.6
2621 Female, age 67, right hemisphere 36.2
2529 Female, age 94, left hemisphere 35.0
1911 Female, age 85, right hemisphere 34.4
Dentate gyrus
nTPM: 35.0
1927 Female, age 91, both hemispheres 39.9
2246 Female, age 85, both hemispheres 35.3
2010 Male, age 76, both hemispheres 34.5
2528 Male, age 74, both hemispheres 34.2
2530 Female, age 94, left hemisphere 33.1
2531 Female, age 67, both hemispheres 33.0
Entorhinal gyrus
nTPM: 35.1
1938 Female, age 85, left hemisphere 36.4
2686 Male, age 75, right hemisphere 36.0
2764 Male, age 80, right hemisphere 35.8
2613 Female, age 94, left hemisphere 35.7
2117 Female, age 91, right hemisphere 33.9
1787 Male, age 76, left hemisphere 32.9
Hippocampus, CA1
nTPM: 39.8
2749 Male, age 80, left hemisphere 53.2
1873 Female, age 85, both hemispheres 40.9
2045 Male, age 76, both hemispheres 35.5
2527 Male, age 74, both hemispheres 35.5
2082 Female, age 91, right hemisphere 33.8
Hippocampus, CA2
nTPM: 36.3
1963 Male, age 80, left hemisphere 44.1
1892 Male, age 76, both hemispheres 41.1
2113 Female, age 91, right hemisphere 34.5
1940 Female, age 85, left hemisphere 34.1
2249 Male, age 74, both hemispheres 33.1
2437 Female, age 94, left hemisphere 31.1
Hippocampus, CA3
nTPM: 38.7
2137 Male, age 80, left hemisphere 45.0
1867 Male, age 76, both hemispheres 39.6
2620 Female, age 94, left hemisphere 38.3
1891 Female, age 85, both hemispheres 37.2
2436 Male, age 74, both hemispheres 36.2
2861 Female, age 67, both hemispheres 35.8
Parahippocampal cortex
nTPM: 36.1
1850 Male, age 80, both hemispheres 43.1
2622 Female, age 67, right hemisphere 38.0
1933 Female, age 85, both hemispheres 36.6
1990 Female, age 91, right hemisphere 36.2
2692 Male, age 74, both hemispheres 35.7
2693 Female, age 94, both hemispheres 35.4
2532 Female, age 72, left hemisphere 34.2
2250 Female, age 67, right hemisphere 34.1
2245 Female, age 91, both hemispheres 33.8
2018 Male, age 76, both hemispheres 33.6
Perirhinal gyrus
nTPM: 38.1
1847 Female, age 91, left hemisphere 40.2
1794 Male, age 80, right hemisphere 39.9
1841 Female, age 85, right hemisphere 39.9
2848 Male, age 76, right hemisphere 35.9
2521 Female, age 94, right hemisphere 34.6
Subiculum
nTPM: 35.3
1901 Male, age 80, both hemispheres 39.5
2729 Female, age 91, right hemisphere 36.5
1977 Female, age 85, both hemispheres 36.4
2619 Male, age 74, both hemispheres 35.2
2438 Female, age 94, left hemisphere 33.1
2042 Male, age 76, both hemispheres 31.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.4
Samples: 255

Max nTPM: 27.1
Min nTPM: 6.9
Std nTPM: 3.2
Median nTPM: 14.0
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 27.1
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 26.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 22.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 22.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 22.2
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 21.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 21.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 21.1
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 21.0
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 20.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 50.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.4
FF:10169-103B7 60 years, female 51.9
FF:10153-102I9 76 years, female 48.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.9
Pig sample Sample description nTPM
Subiculum
nTPM: 21.3
Samples: 4

Max nTPM: 24.9
Min nTPM: 18.2
Sample A Female 24.9
Sample B Female 20.0
Sample C Male 22.2
Sample D Male 18.2
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 20.7
Min nTPM: 16.7
Sample A Female 19.3
Sample B Female 20.7
Sample C Male 20.7
Sample D Male 16.7
Entorhinal cortex
nTPM: 21.9
Samples: 4

Max nTPM: 23.0
Min nTPM: 20.2
Sample A Female 21.9
Sample B Female 20.2
Sample C Male 23.0
Sample D Male 22.5
Ventral hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 23.1
Min nTPM: 16.6
Sample A Female 17.1
Sample B Female 16.6
Sample C Male 23.1
Sample D Male 22.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 13.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 17.9
Min nTPM: 11.4
Sample A Male 12.5
Sample B Male 11.4
Sample C Female 12.0
Sample D Female 17.9
Hippocampal formation
nTPM: 10.7
Samples: 4

Max nTPM: 13.8
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 12.4
Sample C Female 13.8
Sample D Female 8.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
70302998 Antisense, RP_050609_01_D03, Mouse strain C57BL/6J (56 days, male) 7.9

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