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COL9A2
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • COL9A2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CARTILAGE CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS EYE FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:49.7 nTPM
FANTOM5:9.5 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA056316Antibody HPA075286
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 49.7
Samples: 300

Max nTPM: 135.3
Min nTPM: 8.5
Std nTPM: 21.8
Median nTPM: 45.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 135.3
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 125.9
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 105.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 103.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 99.5
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 98.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 98.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 96.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 95.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 95.6
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 93.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 92.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 92.0
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 90.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 89.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 87.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 87.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 86.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 86.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 86.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 84.1
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 84.0
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 83.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 82.4
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 81.6
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 81.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 80.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 80.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 80.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 79.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 79.7
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 79.5
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 78.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 78.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 78.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 77.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 77.3
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 77.1
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 76.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 76.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 76.1
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 75.0
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 75.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 74.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 74.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 74.4
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 74.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 73.3
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 73.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 72.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 72.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 72.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 72.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 71.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 71.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 70.4
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 70.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 70.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 70.0
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 69.9
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 69.9
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 69.8
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 69.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 69.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 68.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 68.8
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 67.8
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 67.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 67.2
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 67.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 66.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 66.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 65.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 65.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 64.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 64.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 64.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 64.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 63.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 63.7
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 63.7
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 63.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 62.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 62.2
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 61.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 61.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 61.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 61.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 60.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 60.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 59.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 59.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 59.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 58.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 58.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 58.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 57.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 57.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 57.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 57.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 57.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 56.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 55.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 55.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 55.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 55.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 55.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 55.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 54.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 54.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 54.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 53.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 53.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 53.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 52.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 52.5
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 52.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 52.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 52.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 52.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 51.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 51.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 51.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 51.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 51.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 51.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 51.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 51.3
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 51.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 50.8
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 50.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 50.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 49.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 49.4
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 49.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 48.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 48.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 48.2
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 47.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 47.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 46.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 46.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 46.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 46.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 45.9
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 45.7
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 45.6
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 45.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 45.5
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 45.4
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 45.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 45.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 45.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 44.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 44.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 43.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 43.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 43.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 43.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.0
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 42.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 42.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 42.7
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 42.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 42.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 42.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 42.4
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 42.0
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 41.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 41.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 41.8
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 41.6
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 41.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 41.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 41.2
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 41.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 41.0
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 41.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 40.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 40.7
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 40.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 40.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 40.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 40.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 40.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 40.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 39.7
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 39.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 39.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 38.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 38.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 38.6
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 38.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 38.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 38.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 37.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 37.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 37.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 37.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 37.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 37.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 37.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 36.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 36.1
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 35.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 35.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 35.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 35.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 35.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 35.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 35.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 35.2
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 35.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 34.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 34.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 34.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 34.2
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 34.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 33.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 33.7
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 33.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 33.4
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 33.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 33.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 32.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 32.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 32.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 32.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 32.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 32.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 31.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 31.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 30.9
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 30.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 30.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 29.6
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 29.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 28.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 28.8
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 28.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 28.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 28.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 28.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 28.3
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 28.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 28.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 27.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 27.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 27.3
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 27.3
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 27.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 27.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 27.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 26.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 26.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 26.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 26.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 26.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 26.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 26.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 25.5
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 25.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 25.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 25.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 25.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 25.0
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 24.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 24.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 24.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 24.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 24.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 23.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 23.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 23.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 23.5
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 23.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 23.1
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 22.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 22.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 22.0
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 21.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 21.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 21.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 21.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 20.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 20.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 20.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 19.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 18.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 18.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 17.7
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 17.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 16.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 15.8
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 12.4
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 11.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 9.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 8.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

9.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 9.5
FF:10164-103B2 76 years, female 9.5

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