COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: High
RNA expressioni
Consensus:5.8 nTPM
HPA:5.8 nTPM
GTEx:2.3 nTPM
FANTOM5:13.0 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA037485
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion High


COLON - HPA RNA-seqi
Average nTPMi 5.8
overview
Male, age 54
Colon sample 67
nTPM: 4.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 5.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 6.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 3.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 3.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 6.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 7.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 8.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 5.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 5.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 5.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 7.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 2.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 2.1
Samples: 419

Max nTPM: 4.4
Min nTPM: 0.8
Std nTPM: 0.5
Median nTPM: 2.1
GTEX-WHSB-1126-SM-GMXAL 50-59 years, male 4.4
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 4.1
GTEX-17KNJ-1826-SM-7LT9N 50-59 years, male 3.8
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 3.7
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 3.5
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 3.3
GTEX-13PVR-1726-SM-5Q5EC 60-69 years, female 3.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 3.3
GTEX-1GF9X-1426-SM-7RHGX 40-49 years, female 3.3
GTEX-1HB9E-2526-SM-D4P35 50-59 years, male 3.3
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 3.3
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Colon - Transverse
Average nTPM: 2.3
Samples: 479

Max nTPM: 4.6
Min nTPM: 0.3
Std nTPM: 0.5
Median nTPM: 2.2
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 4.6
GTEX-1PDJ9-2226-SM-HLJQM 20-29 years, male 4.3
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 4.1
GTEX-1E2YA-2626-SM-7MGWW 50-59 years, male 4.0
GTEX-1128S-1626-SM-5H12O 60-69 years, female 3.9
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 3.9
GTEX-1F75I-2426-SM-9WPOY 40-49 years, male 3.8
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 3.8
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 3.7
GTEX-1JN76-1226-SM-C1YRM 20-29 years, female 3.7
GTEX-147GR-2726-SM-664OO 60-69 years, male 3.6
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 13.0
FF:10014-101C5 62,83,84 years, mixed 13.0

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