HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.0 nTPM
HPA Brain:30.6 nTPM
GTEx:5.0 nTPM
FANTOM5:69.6 Scaled Tags Per Million
Pig:27.3 nTPM
Mouse:16.0 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038697Antibody HPA057607
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 30.6
Sample id Sample description nTPM
Hippocampus
nTPM: 28.0
1911 Female, age 85, right hemisphere 30.4
2621 Female, age 67, right hemisphere 28.5
1898 Male, age 80, left hemisphere 28.1
2148 Female, age 91, left hemisphere 28.1
2529 Female, age 94, left hemisphere 27.8
1855 Male, age 76, left hemisphere 24.9
Dentate gyrus
nTPM: 27.6
2530 Female, age 94, left hemisphere 28.9
2010 Male, age 76, both hemispheres 27.7
2531 Female, age 67, both hemispheres 27.6
2246 Female, age 85, both hemispheres 27.3
2528 Male, age 74, both hemispheres 27.3
1927 Female, age 91, both hemispheres 27.0
Entorhinal gyrus
nTPM: 27.8
2117 Female, age 91, right hemisphere 32.2
1938 Female, age 85, left hemisphere 31.3
2764 Male, age 80, right hemisphere 29.1
2686 Male, age 75, right hemisphere 27.0
2613 Female, age 94, left hemisphere 24.9
1787 Male, age 76, left hemisphere 22.0
Hippocampus, CA1
nTPM: 26.7
1873 Female, age 85, both hemispheres 29.4
2527 Male, age 74, both hemispheres 27.2
2045 Male, age 76, both hemispheres 25.7
2749 Male, age 80, left hemisphere 25.7
2082 Female, age 91, right hemisphere 25.5
Hippocampus, CA2
nTPM: 27.7
1963 Male, age 80, left hemisphere 31.1
1940 Female, age 85, left hemisphere 27.8
2113 Female, age 91, right hemisphere 27.8
2249 Male, age 74, both hemispheres 27.5
1892 Male, age 76, both hemispheres 26.4
2437 Female, age 94, left hemisphere 25.3
Hippocampus, CA3
nTPM: 27.5
1891 Female, age 85, both hemispheres 34.7
2436 Male, age 74, both hemispheres 29.7
1867 Male, age 76, both hemispheres 27.0
2620 Female, age 94, left hemisphere 25.4
2137 Male, age 80, left hemisphere 24.8
2861 Female, age 67, both hemispheres 23.3
Parahippocampal cortex
nTPM: 26.9
1850 Male, age 80, both hemispheres 30.9
2693 Female, age 94, both hemispheres 29.5
2532 Female, age 72, left hemisphere 28.8
1990 Female, age 91, right hemisphere 27.8
2692 Male, age 74, both hemispheres 27.7
1933 Female, age 85, both hemispheres 27.6
2245 Female, age 91, both hemispheres 25.0
2622 Female, age 67, right hemisphere 25.0
2018 Male, age 76, both hemispheres 24.6
2250 Female, age 67, right hemisphere 22.1
Perirhinal gyrus
nTPM: 25.4
1841 Female, age 85, right hemisphere 27.2
1847 Female, age 91, left hemisphere 25.3
2848 Male, age 76, right hemisphere 25.2
1794 Male, age 80, right hemisphere 24.8
2521 Female, age 94, right hemisphere 24.6
Subiculum
nTPM: 30.6
2042 Male, age 76, both hemispheres 34.5
1901 Male, age 80, both hemispheres 32.7
2438 Female, age 94, left hemisphere 30.9
2619 Male, age 74, both hemispheres 29.6
1977 Female, age 85, both hemispheres 29.2
2729 Female, age 91, right hemisphere 26.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 5.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.0
Samples: 255

Max nTPM: 11.4
Min nTPM: 2.4
Std nTPM: 1.2
Median nTPM: 4.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 11.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 9.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 8.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 8.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 8.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 8.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 7.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 7.8
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 7.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 7.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 7.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 69.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.6
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 64.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 27.3
Pig sample Sample description nTPM
Subiculum
nTPM: 25.7
Samples: 4

Max nTPM: 26.9
Min nTPM: 24.6
Sample A Female 26.9
Sample B Female 25.9
Sample C Male 25.3
Sample D Male 24.6
Dorsal hippocampus
nTPM: 27.3
Samples: 4

Max nTPM: 29.4
Min nTPM: 23.6
Sample A Female 29.4
Sample B Female 27.3
Sample C Male 28.9
Sample D Male 23.6
Entorhinal cortex
nTPM: 26.7
Samples: 4

Max nTPM: 30.0
Min nTPM: 23.4
Sample A Female 25.7
Sample B Female 30.0
Sample C Male 27.5
Sample D Male 23.4
Ventral hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 26.5
Min nTPM: 23.8
Sample A Female 26.5
Sample B Female 25.5
Sample C Male 23.8
Sample D Male 26.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 16.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 17.3
Min nTPM: 15.0
Sample A Male 15.5
Sample B Male 15.0
Sample C Female 15.5
Sample D Female 17.3
Hippocampal formation
nTPM: 16.0
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.9
Sample A Male 13.9
Sample B Male 17.1
Sample C Female 18.6
Sample D Female 14.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71493063 Antisense, RP_050913_02_B01, Mouse strain C57BL/6J (56 days, male) 0.2

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