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  • TISSUE

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  • CA11
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:89.9 nTPM
HPA Brain:68.7 nTPM
GTEx:89.9 nTPM
Pig:40.6 nTPM
Mouse:20.3 nTPM
Allen mouse:6.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 35.2
1961 Female, age 42, unknown 44.5
2226 Male, age 75, left hemisphere 25.9
Dorsomedial nucleus
nTPM: 53.6
1989 Male, age 62, unknown 89.7
2017 Female, age 42, unknown 45.9
2041 Female, age 72, unknown 25.1
Lateral hypothalamic area
nTPM: 62.3
1791 Male, age 80, right hemisphere 72.0
2271 Male, age 75, both hemispheres 68.3
2412 Male, age 62, unknown 58.4
2228 Male, age 66, unknown 50.4
Mammillary body
nTPM: 68.7
1923 Female, age 72, unknown 78.2
2413 Male, age 66, unknown 76.5
1834 Female, age 42, unknown 69.8
1948 Female, age 72, unknown 65.2
1945 Male, age 80, right hemisphere 53.5
Paraventricular nucleus
nTPM: 51.4
2700 Male, age 62, unknown 51.4
Preoptic area
nTPM: 42.3
1861 Female, age 42, unknown 47.9
2414 Female, age 72, unknown 46.9
1907 Male, age 80, right hemisphere 32.2
Supraoptic nucleus
nTPM: 42.6
2835 Female, age 72, unknown 54.9
1894 Female, age 72, unknown 41.5
2043 Male, age 62, unknown 31.3
Ventromedial nucleus
nTPM: 55.9
1982 Female, age 72, unknown 66.6
1822 Female, age 42, unknown 45.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 89.9
Samples: 257

Max nTPM: 650.4
Min nTPM: 17.3
Std nTPM: 73.6
Median nTPM: 68.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 650.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 535.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 472.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 347.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 316.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 297.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 277.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 255.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 237.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 236.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 231.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 229.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 221.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 217.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 204.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 202.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 192.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 192.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 185.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 180.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 177.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 171.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 169.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 169.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 167.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 164.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 160.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 159.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 152.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 151.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 146.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 146.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 145.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 144.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 142.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 140.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 140.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 138.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 137.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 137.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 129.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 127.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 125.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 120.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 119.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 117.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 116.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 115.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 115.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 114.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 112.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 110.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 110.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 110.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 108.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 106.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 106.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 106.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 105.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 105.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 105.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 102.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 102.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 101.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 101.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 99.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 98.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 96.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 96.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 96.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 95.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 94.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 94.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 94.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 93.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 92.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 92.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 91.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 91.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 91.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 90.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 90.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 89.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 88.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 87.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 87.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 86.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 86.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 85.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 85.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 83.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 83.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 82.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 82.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 79.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 78.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 77.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 77.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 77.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 76.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 75.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 75.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 75.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 74.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 74.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 74.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 74.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 73.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 73.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 73.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 72.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 72.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 72.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 71.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 71.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 71.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 70.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 70.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 70.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 70.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 70.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 70.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 69.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 69.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 68.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 68.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 68.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 68.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 68.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 67.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 67.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 67.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 67.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 67.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 67.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 67.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 66.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 66.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 65.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 65.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 64.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 64.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 63.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 63.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 63.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 63.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 63.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 63.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 63.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 62.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 62.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 62.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 61.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 61.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 61.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 61.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 60.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 60.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 60.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 60.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 60.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 59.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 59.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 59.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 58.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 58.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 58.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 58.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 58.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 58.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 57.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 57.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 57.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 57.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 56.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 56.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 56.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 56.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 56.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 56.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 55.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 55.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 54.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 54.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 54.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 53.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 53.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 53.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 52.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 52.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 52.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 52.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 51.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 51.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 51.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 51.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 50.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 50.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 50.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 50.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 50.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 49.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 49.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 49.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 49.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 48.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 48.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 47.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 47.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 47.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 46.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 46.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 45.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 45.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 45.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 45.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 44.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 44.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 44.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 44.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 43.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 43.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 42.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 42.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 41.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 41.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 41.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 40.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 40.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 40.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 40.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 40.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 40.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 39.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 36.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 36.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 36.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 35.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 33.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 33.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 33.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 33.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 32.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 32.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 32.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 29.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 28.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 28.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 28.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 27.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 27.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 27.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 25.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 24.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 20.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 19.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 17.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 40.7
Samples: 4

Max nTPM: 56.3
Min nTPM: 19.2
Sample A Female 56.3
Sample B Female 39.9
Sample C Male 47.2
Sample D Male 19.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 20.3
Samples: 4

Max nTPM: 22.1
Min nTPM: 18.4
Sample A Male 20.0
Sample B Male 20.7
Sample C Female 18.4
Sample D Female 22.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.7
68797501 Antisense, RP_050125_02_E12, Mouse strain C57BL/6J (56 days, male) 6.7

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